Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC02P133597 Gene

Subcategory (RNA class) for GC02P133597 Gene

7SK RNA

Quality Score for this RNA gene is

15

Aliases for GC02P133597 Gene

No Aliases found

ORGUL Members for GC02P133597 Gene

No data available for External Ids for GC02P133597 Gene

Summaries for GC02P133597 Gene

GeneCards Summary for GC02P133597 Gene

GC02P133597 is an RNA Gene, and is affiliated with the 7SK RNA class.

fRNAdb sequence ontologies for GC02P133597 Gene

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

Additional gene information for GC02P133597 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02P133597 Gene

Genomics for GC02P133597 Gene

GeneHancer (GH) Regulatory Elements for GC02P133597 Gene

Promoters and enhancers for GC02P133597 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J133566 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 0.3 -28.4 -28376 2.3 TAF1 ZSCAN4 MAX SIN3A ZBTB40 RAD21 YY1 ZNF335 ZSCAN5C FOSL2 NCKAP5 ENSG00000223430 GC02P133597 GC02P133505
GH02J133578 Enhancer 0.8 Ensembl ENCODE 0.4 -16.5 -16492 1.3 RXRA JUN MAX RAD21 YY1 NR2F2 SP1 JUND ATF3 HNF4G NCKAP5 GC02P133597 ENSG00000223430
GH02J133592 Enhancer 0.4 ENCODE 0.7 -4.7 -4725 0.2 USF1 MNT RAD21 GC02P133597 ENSG00000223430 NCKAP5
GH02J133580 Enhancer 0.5 ENCODE 0.4 -14.8 -14815 1.3 PKNOX1 GATA3 JUN SIN3A ATF7 ATF2 NCKAP5 GC02P133597 ENSG00000223430
GH02J133590 Enhancer 0.4 ENCODE 0.4 -5.4 -5445 0.2 EBF1 SP7 GC02P133597 ENSG00000223430 NCKAP5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02P133597 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02P133597 Gene

Genomic Locations for GC02P133597 Gene
chr2:133,596,090-133,596,401
(GRCh38/hg38)
Size:
312 bases
Orientation:
Plus strand

Genomic View for GC02P133597 Gene

Genes around GC02P133597 on UCSC Golden Path with GeneCards custom track

GC02P133597 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02P133597 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC02P133597 Gene

Proteins for GC02P133597 Gene

Post-translational modifications for GC02P133597 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02P133597 Gene

Domains & Families for GC02P133597 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02P133597 Gene

Function for GC02P133597 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02P133597 Gene

Localization for GC02P133597 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02P133597 Gene

Pathways & Interactions for GC02P133597 Gene

SuperPathways for GC02P133597 Gene

No Data Available

Interacting Proteins for GC02P133597 Gene

Gene Ontology (GO) - Biological Process for GC02P133597 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02P133597 Gene

Drugs & Compounds for GC02P133597 Gene

No Compound Related Data Available

Transcripts for GC02P133597 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC02P133597 Gene

No ASD Table

Relevant External Links for GC02P133597 Gene

GeneLoc Exon Structure for
GC02P133597

No data available for mRNA/cDNA for GC02P133597 Gene

Expression for GC02P133597 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02P133597 Gene

Orthologs for GC02P133597 Gene

No data available for Orthologs and Evolution for GC02P133597 Gene

Paralogs for GC02P133597 Gene

No data available for Paralogs for GC02P133597 Gene

Variants for GC02P133597 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02P133597 Gene

Disorders for GC02P133597 Gene

No disorders were found for GC02P133597 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02P133597 Gene

Publications for GC02P133597 Gene

  1. Transcription: surprising role for an elusive small nuclear RNA. (PMID: 11864590) Blencowe BJ (Current biology : CB 2002) 1
  2. Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function. (PMID: 1646389) Wassarman DA … Steitz JA (Molecular and cellular biology 1991) 1

Products for GC02P133597 Gene

Sources for GC02P133597 Gene

Content
Loading form....