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Aliases for GC02M174558 Gene

Subcategory (RNA class) for GC02M174558 Gene


Quality Score for this RNA gene is


Aliases for GC02M174558 Gene

No Aliases found

No data available for External Ids for GC02M174558 Gene

Summaries for GC02M174558 Gene

GeneCards Summary for GC02M174558 Gene

GC02M174558 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC02M174558 Gene - the ORGUL cluster for this gene includes several descriptions:

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

View fRNAdb secondary structures for GC02M174558

Additional gene information for GC02M174558 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC02M174558 Gene

Genomics for GC02M174558 Gene

GeneHancer (GH) Regulatory Elements for GC02M174558 Gene

Promoters and enhancers for GC02M174558 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J174558 Enhancer 0.4 dbSUPER 650.7 -1.5 -1455 2.6 FOXA2 FOXA1 GC02M174558 RNU6-5P WIPF1 GPR155 GC02M174567 ENSG00000236449
GH02J174561 Enhancer 0.9 ENCODE dbSUPER 0.7 -3.6 -3590 1 FOXA2 MAX RAD21 YY1 EGR1 POLR2A HNF4G RXRA REST NR2F2 WIPF1 GC02M174558 GC02M174567 RNU6-5P ENSG00000236449
GH02J174563 Enhancer 0.2 dbSUPER 0.4 -5.8 -5820 1.4 WIPF1 GC02M174567 GC02M174558 RNU6-5P ENSG00000236449
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC02M174558 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02M174558 Gene

Genomic Locations for GC02M174558 Gene
108 bases
Minus strand

Genomic View for GC02M174558 Gene

Genes around GC02M174558 on UCSC Golden Path with GeneCards custom track

GC02M174558 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02M174558 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC02M174558 Gene

ORGUL Member Location for GC02M174558 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC02M174558 Gene

Proteins for GC02M174558 Gene

Post-translational modifications for GC02M174558 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02M174558 Gene

Domains & Families for GC02M174558 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02M174558 Gene

Function for GC02M174558 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02M174558 Gene

Localization for GC02M174558 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02M174558 Gene

Pathways & Interactions for GC02M174558 Gene

SuperPathways for GC02M174558 Gene

No Data Available

Interacting Proteins for GC02M174558 Gene

Gene Ontology (GO) - Biological Process for GC02M174558 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC02M174558 Gene

Drugs & Compounds for GC02M174558 Gene

No Compound Related Data Available

Transcripts for GC02M174558 Gene

fRNAdb Secondary structures for GC02M174558 Gene

  • FR260122
  • FR196212
  • FR027467
  • FR080027

Alternative Splicing Database (ASD) splice patterns (SP) for GC02M174558 Gene

No ASD Table

Relevant External Links for GC02M174558 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC02M174558 Gene

Expression for GC02M174558 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02M174558 Gene

Orthologs for GC02M174558 Gene

No data available for Orthologs and Evolution for GC02M174558 Gene

Paralogs for GC02M174558 Gene

No data available for Paralogs for GC02M174558 Gene

Variants for GC02M174558 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02M174558 Gene

Disorders for GC02M174558 Gene

No disorders were found for GC02M174558 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02M174558 Gene

Publications for GC02M174558 Gene

  1. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  2. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  3. The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions. (PMID: 8797828) Balakin AG … Fournier MJ (Cell 1996) 1
  4. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  5. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC02M174558 Gene

Sources for GC02M174558 Gene

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