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Aliases for GC02M172559 Gene

Subcategory (RNA class) for GC02M172559 Gene

Y RNA

Quality Score for this RNA gene is

15

Aliases for GC02M172559 Gene

No Aliases found

ORGUL Members for GC02M172559 Gene

No data available for External Ids for GC02M172559 Gene

Summaries for GC02M172559 Gene

GeneCards Summary for GC02M172559 Gene

GC02M172559 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC02M172559 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC02M172559 Gene

Genomics for GC02M172559 Gene

GeneHancer (GH) Regulatory Elements for GC02M172559 Gene

Promoters and enhancers for GC02M172559 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J172552 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE 0.7 +3.1 3057 6.1 CLOCK MLX DMAP1 YY1 SLC30A9 SP3 NFYC MEF2D ZNF610 GLIS1 PDK1 ENSG00000225205 METAP1D ENSG00000199866 GC02M172559 GC02P172546
GH02J172600 Enhancer 1.1 ENCODE dbSUPER 0.3 -42.7 -42664 1 ATF1 ARNT NCOA2 TCF12 ZNF766 GATA2 ATF7 NCOA1 MEF2D ZNF184 PDK1 ENSG00000199866 GC02M172559 GC02M172611
GH02J172578 Enhancer 0.6 dbSUPER 0.3 -21.1 -21141 2.1 ARNT ZEB2 ZNF384 ATF2 ZNF507 ZNF280A SKIL NFE2 TRIM24 FOS PDK1 ENSG00000225205 GC02M172559 ENSG00000199866 GC02M172611
GH02J172639 Enhancer 0.8 ENCODE 0.2 -82.0 -82005 2.4 HDAC1 USF1 ATF1 ZBTB40 RFX5 FOSL1 ZNF335 TCF12 ZNF316 RFXANK PDK1 GC02M172611 ENSG00000199866 GC02M172559
GH02J172654 Enhancer 0.7 Ensembl ENCODE 0.2 -97.7 -97651 2.3 JUND BCL6B NFE2 FOS RAPGEF4 RAPGEF4-AS1 PDK1 GC02M172611 ENSG00000199866 GC02M172559
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC02M172559 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02M172559 Gene

Genomic Locations for GC02M172559 Gene
chr2:172,558,152-172,558,252
(GRCh38/hg38)
Size:
101 bases
Orientation:
Minus strand

Genomic View for GC02M172559 Gene

Genes around GC02M172559 on UCSC Golden Path with GeneCards custom track

GC02M172559 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02M172559 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC02M172559 Gene

Proteins for GC02M172559 Gene

Post-translational modifications for GC02M172559 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02M172559 Gene

Domains & Families for GC02M172559 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02M172559 Gene

Function for GC02M172559 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02M172559 Gene

Localization for GC02M172559 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02M172559 Gene

Pathways & Interactions for GC02M172559 Gene

SuperPathways for GC02M172559 Gene

No Data Available

Interacting Proteins for GC02M172559 Gene

Gene Ontology (GO) - Biological Process for GC02M172559 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02M172559 Gene

Drugs & Compounds for GC02M172559 Gene

No Compound Related Data Available

Transcripts for GC02M172559 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC02M172559 Gene

No ASD Table

Relevant External Links for GC02M172559 Gene

GeneLoc Exon Structure for
GC02M172559

No data available for mRNA/cDNA for GC02M172559 Gene

Expression for GC02M172559 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02M172559 Gene

Orthologs for GC02M172559 Gene

No data available for Orthologs and Evolution for GC02M172559 Gene

Paralogs for GC02M172559 Gene

No data available for Paralogs for GC02M172559 Gene

Variants for GC02M172559 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02M172559 Gene

Disorders for GC02M172559 Gene

No disorders were found for GC02M172559 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02M172559 Gene

Publications for GC02M172559 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC02M172559 Gene

Sources for GC02M172559 Gene

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