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Aliases for GC02M138488 Gene

Subcategory (RNA class) for GC02M138488 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC02M138488 Gene

No Aliases found

ORGUL Members for GC02M138488 Gene

No data available for External Ids for GC02M138488 Gene

Summaries for GC02M138488 Gene

GeneCards Summary for GC02M138488 Gene

GC02M138488 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC02M138488 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC02M138488 Gene

Genomics for GC02M138488 Gene

GeneHancer (GH) Regulatory Elements for GC02M138488 Gene

Promoters and enhancers for GC02M138488 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J138500 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +27.1 27073 5.5 SMAD1 MLX ARID4B SIN3A DMAP1 ZNF2 POLR2B ZNF143 SP3 REST SPOPL LOC105373637 GC02M138488
GH02J138490 Enhancer 1.1 ENCODE dbSUPER 0.3 +38.8 38777 1.9 PKNOX1 FOXA2 MLX ARID4B NEUROD1 DMAP1 SLC30A9 RXRA SP5 MIER2 LOC105373637 ENSG00000230569 GC02M138488
GH02J138492 Enhancer 1 ENCODE dbSUPER 0.3 +36.5 36457 2.5 PKNOX1 FOXA2 THRB ZNF48 RARA CREM RXRA ZBTB25 MXD4 GATAD2B LOC105373637 ENSG00000230569 GC02M138488
GH02J138537 Enhancer 0.7 ENCODE 0.4 -6.9 -6918 0.1 HDAC1 TEAD4 TAL1 RELA CC2D1A TCF12 NCOR1 CBFA2T2 TRIM24 SMARCE1 LOC105373637 SPOPL GC02M138488 ENSG00000241772
GH02J138536 Enhancer 0.7 ENCODE 0.4 -6.2 -6235 1.2 PKNOX1 TAL1 EBF1 BMI1 RELA CC2D1A TCF12 ZNF316 CBFA2T2 ATF7 SPOPL LOC105373637 GC02M138488 ENSG00000241772
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC02M138488 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC02M138488 Gene

Genomic Locations for GC02M138488 Gene
chr2:138,488,920-138,530,435
(GRCh38/hg38)
Size:
41,516 bases
Orientation:
Minus strand

Genomic View for GC02M138488 Gene

Genes around GC02M138488 on UCSC Golden Path with GeneCards custom track

GC02M138488 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC02M138488 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC02M138488 Gene

Proteins for GC02M138488 Gene

Post-translational modifications for GC02M138488 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC02M138488 Gene

Domains & Families for GC02M138488 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC02M138488 Gene

Function for GC02M138488 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC02M138488 Gene

Localization for GC02M138488 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC02M138488 Gene

Pathways & Interactions for GC02M138488 Gene

SuperPathways for GC02M138488 Gene

No Data Available

Interacting Proteins for GC02M138488 Gene

Gene Ontology (GO) - Biological Process for GC02M138488 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC02M138488 Gene

Drugs & Compounds for GC02M138488 Gene

No Compound Related Data Available

Transcripts for GC02M138488 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC02M138488 Gene

No ASD Table

Relevant External Links for GC02M138488 Gene

GeneLoc Exon Structure for
GC02M138488

No data available for mRNA/cDNA for GC02M138488 Gene

Expression for GC02M138488 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC02M138488 Gene

Orthologs for GC02M138488 Gene

No data available for Orthologs and Evolution for GC02M138488 Gene

Paralogs for GC02M138488 Gene

No data available for Paralogs for GC02M138488 Gene

Variants for GC02M138488 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC02M138488 Gene

Disorders for GC02M138488 Gene

No disorders were found for GC02M138488 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC02M138488 Gene

Publications for GC02M138488 Gene

No publications were found for GC02M138488 Gene.

Products for GC02M138488 Gene

Sources for GC02M138488 Gene

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