Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC01P067513 Gene

Subcategory (RNA class) for GC01P067513 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for GC01P067513 Gene

No Aliases found

No data available for External Ids for GC01P067513 Gene

Summaries for GC01P067513 Gene

GeneCards Summary for GC01P067513 Gene

GC01P067513 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC01P067513 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for GC01P067513 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01P067513 Gene

Genomics for GC01P067513 Gene

GeneHancer (GH) Regulatory Elements for GC01P067513 Gene

Promoters and enhancers for GC01P067513 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J067513 Enhancer 0.9 ENCODE 600.7 +0.8 762 1.3 CEBPG TFE3 TRIM24 SP1 PPARG SP5 PKNOX1 ZNF24 RXRA CEBPA GC01P067513 RNU7-80P RNU6-1031P GADD45A LINC01702
GH01J067478 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.3 -34.1 -34130 1.1 CC2D1A ZKSCAN8 CBFA2T2 MLLT1 ZNF384 TRIM24 ZNF639 SMARCA4 MTA1 GLIS2 PIR38616 GC01P067513
GH01J067500 Enhancer 0.9 ENCODE 0.4 -13.0 -12953 0.2 CC2D1A CTCF CEBPG SP7 SP1 PPARG RAD21 KAT8 RXRA ARID2 RNU6-387P RNU4ATAC4P GC01P067513 PIR38616
GH01J067521 Enhancer 0.7 ENCODE 0.4 +8.6 8576 1.1 SP1 RXRA CEBPA NFKBIZ FOXA2 SOX13 JUND ATF3 YY1 ZBTB33 LINC01702 RNU7-80P GADD45A GC01P067513
GH01J067484 Enhancer 0.6 Ensembl 0.3 -28.9 -28855 0.6 SP1 ZIC2 ZBTB17 ZFHX2 HNF4A FEZF1 GLIS1 PRDM6 EGR2 RNU6-387P C1orf141 RNU4ATAC4P PIR38616 GC01P067513
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P067513 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P067513 Gene

Genomic Locations for GC01P067513 Gene
chr1:67,513,556-67,513,587
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand

Genomic View for GC01P067513 Gene

Genes around GC01P067513 on UCSC Golden Path with GeneCards custom track

GC01P067513 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P067513 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01P067513 Gene

ORGUL Member Location for GC01P067513 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P067513 Gene

Proteins for GC01P067513 Gene

Post-translational modifications for GC01P067513 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P067513 Gene

Domains & Families for GC01P067513 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P067513 Gene

Function for GC01P067513 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P067513 Gene

Localization for GC01P067513 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P067513 Gene

Pathways & Interactions for GC01P067513 Gene

PathCards logo

SuperPathways for GC01P067513 Gene

No Data Available

Interacting Proteins for GC01P067513 Gene

Gene Ontology (GO) - Biological Process for GC01P067513 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P067513 Gene

Drugs & Compounds for GC01P067513 Gene

No Compound Related Data Available

Transcripts for GC01P067513 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P067513 Gene

No ASD Table

Relevant External Links for GC01P067513 Gene

GeneLoc Exon Structure for
GC01P067513

No data available for mRNA/cDNA for GC01P067513 Gene

Expression for GC01P067513 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P067513 Gene

Orthologs for GC01P067513 Gene

No data available for Orthologs and Evolution for GC01P067513 Gene

Paralogs for GC01P067513 Gene

No data available for Paralogs for GC01P067513 Gene

Variants for GC01P067513 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P067513 Gene

Disorders for GC01P067513 Gene

No disorders were found for GC01P067513 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P067513 Gene

Publications for GC01P067513 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC01P067513 Gene

Products for GC01P067513 Gene

Sources for GC01P067513 Gene

Content
Loading form....