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Aliases for GC01P064355 Gene

Subcategory (RNA class) for GC01P064355 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for GC01P064355 Gene

No Aliases found

ORGUL Members for GC01P064355 Gene

No data available for External Ids for GC01P064355 Gene

Summaries for GC01P064355 Gene

GeneCards Summary for GC01P064355 Gene

GC01P064355 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC01P064355 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC01P064355

Additional gene information for GC01P064355 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01P064355 Gene

Genomics for GC01P064355 Gene

GeneHancer (GH) Regulatory Elements for GC01P064355 Gene

Promoters and enhancers for GC01P064355 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J064342 Enhancer 0.9 ENCODE 0.4 -11.2 -11219 3.1 ZNF384 NFIB ZSCAN21 SP7 FOSL2 GLIS2 ZNF600 PRDM10 ZIC2 TARDBP ITGB3BP EFCAB7 ALG6 UBE2U GC01P064331 GC01P064355
GH01J064345 Enhancer 0.8 ENCODE 0.4 -9.5 -9517 0.2 ZSCAN21 SP7 KLF14 ZNF600 PRDM10 ZIC2 ZSCAN4 ZNF776 ZNF639 ZNF629 SLC2A3P2 ITGB3BP EFCAB7 DLEU2L ALG6 ENSG00000272506 ROR1 JAK1 LINC01359 GC01P064355
GH01J064337 Enhancer 0.2 Ensembl 0.4 -17.5 -17509 0.2 GC01P064331 GC01P064355
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P064355 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P064355 Gene

Genomic Locations for GC01P064355 Gene
chr1:64,355,210-64,355,240
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand

Genomic View for GC01P064355 Gene

Genes around GC01P064355 on UCSC Golden Path with GeneCards custom track

GC01P064355 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P064355 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01P064355 Gene

ORGUL Member Location for GC01P064355 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P064355 Gene

Proteins for GC01P064355 Gene

Post-translational modifications for GC01P064355 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P064355 Gene

Domains & Families for GC01P064355 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P064355 Gene

Function for GC01P064355 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P064355 Gene

Localization for GC01P064355 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P064355 Gene

Pathways & Interactions for GC01P064355 Gene

PathCards logo

SuperPathways for GC01P064355 Gene

No Data Available

Interacting Proteins for GC01P064355 Gene

Gene Ontology (GO) - Biological Process for GC01P064355 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P064355 Gene

Drugs & Compounds for GC01P064355 Gene

No Compound Related Data Available

Transcripts for GC01P064355 Gene

fRNAdb Secondary structures for GC01P064355 Gene

  • FR279894
  • FR006645

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P064355 Gene

No ASD Table

Relevant External Links for GC01P064355 Gene

GeneLoc Exon Structure for
GC01P064355

No data available for mRNA/cDNA for GC01P064355 Gene

Expression for GC01P064355 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P064355 Gene

Orthologs for GC01P064355 Gene

No data available for Orthologs and Evolution for GC01P064355 Gene

Paralogs for GC01P064355 Gene

No data available for Paralogs for GC01P064355 Gene

Variants for GC01P064355 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P064355 Gene

Disorders for GC01P064355 Gene

No disorders were found for GC01P064355 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P064355 Gene

Publications for GC01P064355 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC01P064355 Gene

Products for GC01P064355 Gene

Sources for GC01P064355 Gene

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