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Aliases for GC01P052280 Gene

Subcategory (RNA class) for GC01P052280 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01P052280 Gene

No Aliases found

ORGUL Members for GC01P052280 Gene

No data available for External Ids for GC01P052280 Gene

Summaries for GC01P052280 Gene

GeneCards Summary for GC01P052280 Gene

GC01P052280 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01P052280 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01P052280 Gene

Genomics for GC01P052280 Gene

GeneHancer (GH) Regulatory Elements for GC01P052280 Gene

Promoters and enhancers for GC01P052280 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J052296 Enhancer 0.9 Ensembl ENCODE 0.4 +15.9 15860 0.6 CC2D1A CTCF RAD21 PRDM10 GATAD2A REST TRIM22 SOX6 ZNF10 RUNX3 GC01P052280 GC01M052352 GC01M052353 ZFYVE9
GH01J052330 Enhancer 1.1 FANTOM5 Ensembl 0.3 +49.8 49761 0.8 GTF2F1 CTCF CDC5L BACH1 NCOA6 TRIM24 EGR1 MTA1 DPF2 IKZF1 CC2D1B PLA2G12AP1 TXNDC12-AS1 GC01M052352 GC01M052353 GC01P052280 ZFYVE9
GH01J052288 Enhancer 0.5 Ensembl 0.4 +7.7 7661 0.2 ZNF24 ZBTB44 EHMT2 FOSL1 ZNF792 CHAMP1 FOS GC01P052280 GC01M052353 GC01M052352 ZFYVE9
GH01J052328 Enhancer 0.8 Ensembl ENCODE 0.3 +48.3 48261 0.6 MAFK SMARCA4 PKNOX1 ZNF316 NFE2 FOXA2 MAFG SAP130 DPF2 FOS CC2D1B PLA2G12AP1 TXNDC12-AS1 GC01M052352 GC01M052353 GC01P052280 ZFYVE9
GH01J052268 Enhancer 0.5 ENCODE 0.4 -12.1 -12076 0.2 MAFK ZNF316 MAFG EMSY GC01P052254 GC01P052280 ZFYVE9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P052280 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P052280 Gene

Genomic Locations for GC01P052280 Gene
chr1:52,280,640-52,283,074
(GRCh38/hg38)
Size:
2,435 bases
Orientation:
Plus strand

Genomic View for GC01P052280 Gene

Genes around GC01P052280 on UCSC Golden Path with GeneCards custom track

GC01P052280 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P052280 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P052280 Gene

Proteins for GC01P052280 Gene

Post-translational modifications for GC01P052280 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P052280 Gene

Domains & Families for GC01P052280 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P052280 Gene

Function for GC01P052280 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P052280 Gene

Localization for GC01P052280 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P052280 Gene

Pathways & Interactions for GC01P052280 Gene

PathCards logo

SuperPathways for GC01P052280 Gene

No Data Available

Interacting Proteins for GC01P052280 Gene

Gene Ontology (GO) - Biological Process for GC01P052280 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P052280 Gene

Drugs & Compounds for GC01P052280 Gene

No Compound Related Data Available

Transcripts for GC01P052280 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P052280 Gene

No ASD Table

Relevant External Links for GC01P052280 Gene

GeneLoc Exon Structure for
GC01P052280

No data available for mRNA/cDNA for GC01P052280 Gene

Expression for GC01P052280 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P052280 Gene

Orthologs for GC01P052280 Gene

No data available for Orthologs and Evolution for GC01P052280 Gene

Paralogs for GC01P052280 Gene

No data available for Paralogs for GC01P052280 Gene

Variants for GC01P052280 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P052280 Gene

Disorders for GC01P052280 Gene

No disorders were found for GC01P052280 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P052280 Gene

Publications for GC01P052280 Gene

No publications were found for GC01P052280 Gene.

No data available for External Links for GC01P052280 Gene

Products for GC01P052280 Gene

Sources for GC01P052280 Gene

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