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Aliases for GC01P051865 Gene

Subcategory (RNA class) for GC01P051865 Gene


Quality Score for this RNA gene is


Aliases for GC01P051865 Gene

No Aliases found

ORGUL Members for GC01P051865 Gene

No data available for External Ids for GC01P051865 Gene

Summaries for GC01P051865 Gene

GeneCards Summary for GC01P051865 Gene

GC01P051865 is an RNA Gene, and is affiliated with the Y RNA class.

fRNAdb sequence ontologies for GC01P051865 Gene

  • Y RNA: Y RNAs are components of the Ro ribonucleoprotein particle (Ro RNP), in association with Ro60 and La proteins. The Y RNAs and Ro60 and La proteins are well conserved, but the function of the Ro RNP is not known. In humans the RNA component can be one of four small RNAs -- hY1, hY3, hY4 and hY5. These small RNAs are predicted to fold into a conserved secondary structure containing three stem structures. The largest of the four, hY1, contains an additional hairpin. This family includes a significant number of annotated pseudogenes and the model is expected to discriminate poorly between real and Y RNA related pseudogenes.

View fRNAdb secondary structures for GC01P051865

Additional gene information for GC01P051865 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01P051865 Gene

Genomics for GC01P051865 Gene

GeneHancer (GH) Regulatory Elements for GC01P051865 Gene

Promoters and enhancers for GC01P051865 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J051874 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +11.9 11869 5.4 CC2D1A SP1 ZFX CBFA2T2 ZNF148 NKRF MLLT1 ZNF121 CEBPG POLR2A NRDC ENSG00000266993 TUT4 CC2D1B PRPF38A RPS13P2 GPX7 OSBPL9 GC01P051865
GH01J051866 Enhancer 0.7 dbSUPER 0.7 +2.2 2156 1.8 MLLT1 CEBPG IKZF1 CEBPA ZNF24 NR2C1 SOX13 SOX6 LEF1 FOXA2 NRDC RNU6-877P GC01P051865
GH01J051863 Enhancer 0.6 ENCODE 0.7 -2.1 -2058 0.2 CREM IKZF1 IKZF2 PKNOX1 DPF2 RUNX3 BCL11A NBN SMARCA5 RB1 RNU6-877P GC01M051857 GC01P051865 NRDC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P051865 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P051865 Gene

Genomic Locations for GC01P051865 Gene
78 bases
Plus strand

Genomic View for GC01P051865 Gene

Genes around GC01P051865 on UCSC Golden Path with GeneCards custom track

GC01P051865 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P051865 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01P051865 Gene

ORGUL Member Location for GC01P051865 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P051865 Gene

Proteins for GC01P051865 Gene

Post-translational modifications for GC01P051865 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P051865 Gene

Domains & Families for GC01P051865 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P051865 Gene

Function for GC01P051865 Gene

Phenotypes From GWAS Catalog for GC01P051865 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P051865 Gene

Localization for GC01P051865 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P051865 Gene

Pathways & Interactions for GC01P051865 Gene

PathCards logo

SuperPathways for GC01P051865 Gene

No Data Available

Interacting Proteins for GC01P051865 Gene

Gene Ontology (GO) - Biological Process for GC01P051865 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC01P051865 Gene

Drugs & Compounds for GC01P051865 Gene

No Compound Related Data Available

Transcripts for GC01P051865 Gene

fRNAdb Secondary structures for GC01P051865 Gene

  • FR297313

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P051865 Gene

No ASD Table

Relevant External Links for GC01P051865 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC01P051865 Gene

Expression for GC01P051865 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P051865 Gene

Orthologs for GC01P051865 Gene

No data available for Orthologs and Evolution for GC01P051865 Gene

Paralogs for GC01P051865 Gene

No data available for Paralogs for GC01P051865 Gene

Variants for GC01P051865 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P051865 Gene

Disorders for GC01P051865 Gene

No disorders were found for GC01P051865 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P051865 Gene

Publications for GC01P051865 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

No data available for External Links for GC01P051865 Gene

Products for GC01P051865 Gene

Sources for GC01P051865 Gene

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