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Aliases for GC01P051316 Gene

Subcategory (RNA class) for GC01P051316 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01P051316 Gene

No Aliases found

ORGUL Members for GC01P051316 Gene

No data available for External Ids for GC01P051316 Gene

Summaries for GC01P051316 Gene

GeneCards Summary for GC01P051316 Gene

GC01P051316 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01P051316 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01P051316 Gene

Genomics for GC01P051316 Gene

GeneHancer (GH) Regulatory Elements for GC01P051316 Gene

Promoters and enhancers for GC01P051316 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J051316 Enhancer 0.5 dbSUPER 600.7 +0.1 55 0.6 NFIB NFIC NFIA EGR2 GC01P051316 LOC105378717 TTC39A
GH01J051296 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 -19.2 -19163 1.8 ZNF652 CC2D1A ELF3 CTCF MLLT1 GTF2F1 MYC TFE3 TRIM24 SP7 TTC39A GC01P051297 ENSG00000236434 RNU6-877P GC01P051316
GH01J051303 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -12.4 -12411 1 RELA IKZF1 GLIS2 IKZF2 RUNX3 ZSCAN29 BCOR EBF1 JUN NFE2 TTC39A ENSG00000236434 RNU6-877P EPS15 GC01P051297 GC01P051316
GH01J051313 Enhancer 1 ENCODE dbSUPER 0.7 -2.0 -2021 2.7 SP1 CAVIN1 IKZF1 PKNOX1 CEBPB ZFX SCRT2 CTCF ZBTB20 ZNF184 LINC01562 GC01P051316 GC01P051297 TTC39A
GH01J051321 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +5.2 5224 1 NCOA3 ZBTB8A CTBP1 FOXK2 ESRRA FOXA1 ZNF592 ADNP FEZF1 PRDM6 TTC39A RNU6-877P ENSG00000236434 GC01P051316 LOC105378717
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P051316 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P051316 Gene

Genomic Locations for GC01P051316 Gene
chr1:51,316,492-51,319,537
(GRCh38/hg38)
Size:
3,046 bases
Orientation:
Plus strand

Genomic View for GC01P051316 Gene

Genes around GC01P051316 on UCSC Golden Path with GeneCards custom track

GC01P051316 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P051316 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P051316 Gene

Proteins for GC01P051316 Gene

Post-translational modifications for GC01P051316 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P051316 Gene

Domains & Families for GC01P051316 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P051316 Gene

Function for GC01P051316 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P051316 Gene

Localization for GC01P051316 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P051316 Gene

Pathways & Interactions for GC01P051316 Gene

PathCards logo

SuperPathways for GC01P051316 Gene

No Data Available

Interacting Proteins for GC01P051316 Gene

Gene Ontology (GO) - Biological Process for GC01P051316 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P051316 Gene

Drugs & Compounds for GC01P051316 Gene

No Compound Related Data Available

Transcripts for GC01P051316 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P051316 Gene

No ASD Table

Relevant External Links for GC01P051316 Gene

GeneLoc Exon Structure for
GC01P051316

No data available for mRNA/cDNA for GC01P051316 Gene

Expression for GC01P051316 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P051316 Gene

Orthologs for GC01P051316 Gene

No data available for Orthologs and Evolution for GC01P051316 Gene

Paralogs for GC01P051316 Gene

No data available for Paralogs for GC01P051316 Gene

Variants for GC01P051316 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P051316 Gene

Disorders for GC01P051316 Gene

No disorders were found for GC01P051316 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P051316 Gene

Publications for GC01P051316 Gene

No publications were found for GC01P051316 Gene.

No data available for External Links for GC01P051316 Gene

Products for GC01P051316 Gene

Sources for GC01P051316 Gene

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