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Aliases for GC01P047350 Gene

Subcategory (RNA class) for GC01P047350 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01P047350 Gene

No Aliases found

ORGUL Members for GC01P047350 Gene

No data available for External Ids for GC01P047350 Gene

Summaries for GC01P047350 Gene

GeneCards Summary for GC01P047350 Gene

GC01P047350 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01P047350 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01P047350 Gene

Genomics for GC01P047350 Gene

GeneHancer (GH) Regulatory Elements for GC01P047350 Gene

Promoters and enhancers for GC01P047350 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J047351 Enhancer 0.9 Ensembl ENCODE 600.7 +1.3 1262 1.1 BACH1 MAFK RELA SMARCA4 IKZF1 NFE2L2 PKNOX1 ZNF24 HDAC1 ZNF316 GC01P047350 STIL FOXE3 CMPK1 GC01M047395
GH01J047348 Enhancer 0.6 Ensembl 600.7 -1.6 -1597 1 ZBTB8A ZNF561 ZSCAN5C OSR2 BCL11A FOXA2 SCRT1 OVOL3 ZNF18 ZNF213 GC01P047350 FOXE3 LINC01389 FOXD2 FOXD2-AS1 CYP4A22-AS1 LINC00853 CMPK1
GH01J047332 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.0 -16009 4.2 CC2D1A ZFX SIX5 ZNF148 NKRF POLR2A MLLT1 ZNF121 ZNF687 AHR CMPK1 ENSG00000226252 FOXE3 TAL1 LINC01389 PDZK1IP1 FOXD2 GC01P047350
GH01J047379 Enhancer 0.9 ENCODE 0.3 +29.5 29496 0.1 ZNF652 ELF3 CBFA2T2 CEBPG RERE PPARG SP5 ZNF644 SMARCA4 KAT8 GC01M047395 GC01P047350
GH01J047388 Enhancer 1 Ensembl ENCODE 0.3 +38.3 38336 1.3 CC2D1A CTCF ZSCAN21 RAD21 ZNF600 PRDM10 ZNF143 REST PKNOX1 TRIM22 FOXD2 PDZK1IP1 MOB3C GC01M047395 GC01P047350 LINC01389
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P047350 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P047350 Gene

Genomic Locations for GC01P047350 Gene
chr1:47,350,298-47,409,371
(GRCh38/hg38)
Size:
59,074 bases
Orientation:
Plus strand

Genomic View for GC01P047350 Gene

Genes around GC01P047350 on UCSC Golden Path with GeneCards custom track

GC01P047350 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P047350 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P047350 Gene

Proteins for GC01P047350 Gene

Post-translational modifications for GC01P047350 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P047350 Gene

Domains & Families for GC01P047350 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P047350 Gene

Function for GC01P047350 Gene

Phenotypes From GWAS Catalog for GC01P047350 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P047350 Gene

Localization for GC01P047350 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P047350 Gene

Pathways & Interactions for GC01P047350 Gene

PathCards logo

SuperPathways for GC01P047350 Gene

No Data Available

Interacting Proteins for GC01P047350 Gene

Gene Ontology (GO) - Biological Process for GC01P047350 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P047350 Gene

Drugs & Compounds for GC01P047350 Gene

No Compound Related Data Available

Transcripts for GC01P047350 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P047350 Gene

No ASD Table

Relevant External Links for GC01P047350 Gene

GeneLoc Exon Structure for
GC01P047350

No data available for mRNA/cDNA for GC01P047350 Gene

Expression for GC01P047350 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P047350 Gene

Orthologs for GC01P047350 Gene

No data available for Orthologs and Evolution for GC01P047350 Gene

Paralogs for GC01P047350 Gene

No data available for Paralogs for GC01P047350 Gene

Variants for GC01P047350 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P047350 Gene

Disorders for GC01P047350 Gene

No disorders were found for GC01P047350 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P047350 Gene

Publications for GC01P047350 Gene

No publications were found for GC01P047350 Gene.

No data available for External Links for GC01P047350 Gene

Products for GC01P047350 Gene

Sources for GC01P047350 Gene

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