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Aliases for GC01P045917 Gene

Subcategory (RNA class) for GC01P045917 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01P045917 Gene

No Aliases found

ORGUL Members for GC01P045917 Gene

No data available for External Ids for GC01P045917 Gene

Summaries for GC01P045917 Gene

GeneCards Summary for GC01P045917 Gene

GC01P045917 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01P045917 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01P045917 Gene

Genomics for GC01P045917 Gene

GeneHancer (GH) Regulatory Elements for GC01P045917 Gene

Promoters and enhancers for GC01P045917 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J045912 Promoter/Enhancer 1.3 Ensembl ENCODE 0.7 -3.2 -3171 4.7 CBFA2T2 ZNF148 ZSCAN21 TRIM24 SP7 CREM EGR1 PKNOX1 PHF21A ATF1 MAST2 CCDC163 GC01P045917 LOC105378694
GH01J045924 Enhancer 0.9 ENCODE 0.4 +10.1 10116 6.5 CBFA2T2 MLLT1 ZNF121 CEBPG SP7 ZNF548 PRDM1 SMARCA4 POLR2A RXRA MAST2 GPBP1L1 ENSG00000234329 LRRC41 TOE1 ENSG00000226957 EFCAB14-AS1 NASP IPP CCDC163
GH01J045977 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.2 +61.5 61537 2.7 ZNF121 SP7 SP1 PPARG ZNF384 MZF1 KAT8 FOSL2 RXRA GATAD2A CCDC163 MAST2 GC01M046029 GC01P045917
GH01J045971 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 +56.4 56413 6 ZNF384 RXRA PRDM10 ATF7 MNT ATF2 USF1 ZNF792 ZNF274 PRDM4 CCDC163 MAST2 GPBP1L1 ENSG00000234329 TOE1 LRRC41 RPS15AP10 EFCAB14-AS1 MUTYH ZSWIM5
GH01J045953 Enhancer 0.8 ENCODE 0.3 +36.6 36646 2.1 BACH1 MAFK TRIM24 SP1 SMARCA4 POLR2A RXRA IKZF1 ZNF316 EP300 MAST2 LRRC41 IPP NASP TOE1 LURAP1 CCDC163 GC01P045917 GC01M046029
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P045917 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P045917 Gene

Genomic Locations for GC01P045917 Gene
chr1:45,917,632-45,935,313
(GRCh38/hg38)
Size:
17,682 bases
Orientation:
Plus strand

Genomic View for GC01P045917 Gene

Genes around GC01P045917 on UCSC Golden Path with GeneCards custom track

GC01P045917 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P045917 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P045917 Gene

Proteins for GC01P045917 Gene

Post-translational modifications for GC01P045917 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P045917 Gene

Domains & Families for GC01P045917 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P045917 Gene

Function for GC01P045917 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P045917 Gene

Localization for GC01P045917 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P045917 Gene

Pathways & Interactions for GC01P045917 Gene

PathCards logo

SuperPathways for GC01P045917 Gene

No Data Available

Interacting Proteins for GC01P045917 Gene

Gene Ontology (GO) - Biological Process for GC01P045917 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P045917 Gene

Drugs & Compounds for GC01P045917 Gene

No Compound Related Data Available

Transcripts for GC01P045917 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P045917 Gene

No ASD Table

Relevant External Links for GC01P045917 Gene

GeneLoc Exon Structure for
GC01P045917

No data available for mRNA/cDNA for GC01P045917 Gene

Expression for GC01P045917 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P045917 Gene

Orthologs for GC01P045917 Gene

No data available for Orthologs and Evolution for GC01P045917 Gene

Paralogs for GC01P045917 Gene

No data available for Paralogs for GC01P045917 Gene

Variants for GC01P045917 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P045917 Gene

Disorders for GC01P045917 Gene

No disorders were found for GC01P045917 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P045917 Gene

Publications for GC01P045917 Gene

No publications were found for GC01P045917 Gene.

No data available for External Links for GC01P045917 Gene

Products for GC01P045917 Gene

Sources for GC01P045917 Gene

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