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Aliases for GC01P040752 Gene

Subcategory (RNA class) for GC01P040752 Gene

miRNA

Quality Score for this RNA gene is

10

Aliases for GC01P040752 Gene

No Aliases found

ORGUL Members for GC01P040752 Gene

No data available for External Ids for GC01P040752 Gene

Summaries for GC01P040752 Gene

GeneCards Summary for GC01P040752 Gene

GC01P040752 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC01P040752 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

Additional gene information for GC01P040752 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01P040752 Gene

Genomics for GC01P040752 Gene

GeneHancer (GH) Regulatory Elements for GC01P040752 Gene

Promoters and enhancers for GC01P040752 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I040708 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 -41.3 -41337 6.1 PKNOX1 SMAD1 FOXA2 ARNT ARID4B FEZF1 DMAP1 YY1 SLC30A9 POLR2B NFYC EXO5 RLF RIMS3 TRIT1 LOC105378674 NFYC-AS1 MIR30E MIR30C1 LOC105378672
GH01I040735 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -16.4 -16390 1.3 MEIS2 USF1 ZBTB21 JUN TEAD4 TAL1 MAX CEBPG TCF12 ZNF316 RIMS3 LOC105378674 MIR30C1 NFYC KCNQ4 GC01P040752 NFYC-AS1
GH01I040690 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.2 -59.9 -59874 4.4 ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 SP3 NFYC MEF2D RIMS3 NFYC-AS1 NFYC ENSG00000259943 EXO5 TRIT1 LOC105378674 ZFP69 SLFNL1 MIR30C1
GH01I040715 Enhancer 1 ENCODE dbSUPER 0.3 -36.6 -36606 1.5 ELF3 FOXA2 ARID4B DNMT3B ZSCAN9 RARA CREM MIXL1 RXRA PPARG NFYC MIR30E MIR30C1 NFYC-AS1 GC01P040752
GH01I040698 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -53.0 -53032 2 HDGF ATF1 ZBTB40 BATF IRF4 ZNF121 FOS ATF7 IKZF2 RUNX3 RIMS3 LOC105378674 MIR30E MIR30C1 NFYC ZNF684 KCNQ4 EXO5 CITED4 ZFP69
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC01P040752 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P040752 Gene

Genomic Locations for GC01P040752 Gene
chr1:40,752,575-40,752,671
(GRCh38/hg38)
Size:
97 bases
Orientation:
Plus strand
chr1:40,747,986-40,749,177
(GRCh37/hg19)

Genomic View for GC01P040752 Gene

Genes around GC01P040752 on UCSC Golden Path with GeneCards custom track

GC01P040752 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P040752 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P040752 Gene

Proteins for GC01P040752 Gene

Post-translational modifications for GC01P040752 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P040752 Gene

Domains & Families for GC01P040752 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P040752 Gene

Function for GC01P040752 Gene

Phenotypes From GWAS Catalog for GC01P040752 Gene

Animal Model Products

miRNA for GC01P040752 Gene

miRTarBase miRNAs that target GC01P040752

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC01P040752 Gene

Localization for GC01P040752 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P040752 Gene

Pathways & Interactions for GC01P040752 Gene

SuperPathways for GC01P040752 Gene

No Data Available

Interacting Proteins for GC01P040752 Gene

Gene Ontology (GO) - Biological Process for GC01P040752 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P040752 Gene

Drugs & Compounds for GC01P040752 Gene

No Compound Related Data Available

Transcripts for GC01P040752 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P040752 Gene

No ASD Table

Relevant External Links for GC01P040752 Gene

GeneLoc Exon Structure for
GC01P040752

No data available for mRNA/cDNA for GC01P040752 Gene

Expression for GC01P040752 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P040752 Gene

Orthologs for GC01P040752 Gene

No data available for Orthologs and Evolution for GC01P040752 Gene

Paralogs for GC01P040752 Gene

No data available for Paralogs for GC01P040752 Gene

Variants for GC01P040752 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P040752 Gene

Disorders for GC01P040752 Gene

No disorders were found for GC01P040752 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P040752 Gene

Publications for GC01P040752 Gene

  1. Identification of clustered microRNAs using an ab initio prediction method. (PMID: 16274478) Sewer A … Zavolan M (BMC bioinformatics 2005) 1

Products for GC01P040752 Gene

Sources for GC01P040752 Gene

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