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Aliases for GC01P040586 Gene

Subcategory (RNA class) for GC01P040586 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01P040586 Gene

No Aliases found

ORGUL Members for GC01P040586 Gene

No data available for External Ids for GC01P040586 Gene

Summaries for GC01P040586 Gene

GeneCards Summary for GC01P040586 Gene

GC01P040586 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01P040586 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01P040586 Gene

Genomics for GC01P040586 Gene

GeneHancer (GH) Regulatory Elements for GC01P040586 Gene

Promoters and enhancers for GC01P040586 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J040583 Enhancer 0.9 Ensembl ENCODE 600.7 -1.7 -1663 0.9 TRIM24 SMARCA4 GTF2E2 HDAC1 CEBPB ZBTB20 CTBP1 JUND HDAC2 FOS GC01P040586 ZFP69 ZNF684 ENSG00000227278 ENSG00000238186 EXO5 ENSG00000238287 NFYC MIR30C1 MIR30E
GH01J040592 Promoter 0.9 Ensembl 0.4 +7.2 7205 0.2 CC2D1A CTCF REST RFX1 ZSCAN5C RUNX3 PKNOX1 RAD21 SMC3 ZNF614 GTF2F2P2 ENSG00000238287 EXO5 ZNF684 NFYC MIR30C1 MIR30E GC01P040586
GH01J040574 Enhancer 0.7 Ensembl ENCODE 0.4 -10.6 -10595 2.6 SOX6 CTBP1 ZNF766 IKZF1 ZFP69 ENSG00000238287 EXO5 ENSG00000227278 ENSG00000238186 ZNF684 GC01P040586 ENSG00000236505
GH01J040566 Enhancer 0.5 Ensembl 0.4 -18.0 -17995 2.2 CEBPG SP5 CEBPA GATAD2A ZNF585B FOXA1 BCL6 ENSG00000238287 ENSG00000259943 ZFP69 NFYC-AS1 EXO5 LOC105378673 ENSG00000236505 GC01P040586
GH01J040590 Enhancer 0.2 Ensembl 0.4 +5.5 5504 0.4 ZNF684 EXO5 ENSG00000238287 NFYC MIR30E MIR30C1 GTF2F2P2 GC01P040586
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P040586 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P040586 Gene

Genomic Locations for GC01P040586 Gene
chr1:40,585,296-40,589,106
(GRCh38/hg38)
Size:
3,811 bases
Orientation:
Plus strand

Genomic View for GC01P040586 Gene

Genes around GC01P040586 on UCSC Golden Path with GeneCards custom track

GC01P040586 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P040586 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P040586 Gene

Proteins for GC01P040586 Gene

Post-translational modifications for GC01P040586 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P040586 Gene

Domains & Families for GC01P040586 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P040586 Gene

Function for GC01P040586 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P040586 Gene

Localization for GC01P040586 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P040586 Gene

Pathways & Interactions for GC01P040586 Gene

PathCards logo

SuperPathways for GC01P040586 Gene

No Data Available

Interacting Proteins for GC01P040586 Gene

Gene Ontology (GO) - Biological Process for GC01P040586 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P040586 Gene

Drugs & Compounds for GC01P040586 Gene

No Compound Related Data Available

Transcripts for GC01P040586 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P040586 Gene

No ASD Table

Relevant External Links for GC01P040586 Gene

GeneLoc Exon Structure for
GC01P040586

No data available for mRNA/cDNA for GC01P040586 Gene

Expression for GC01P040586 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P040586 Gene

Orthologs for GC01P040586 Gene

No data available for Orthologs and Evolution for GC01P040586 Gene

Paralogs for GC01P040586 Gene

No data available for Paralogs for GC01P040586 Gene

Variants for GC01P040586 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P040586 Gene

Disorders for GC01P040586 Gene

No disorders were found for GC01P040586 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P040586 Gene

Publications for GC01P040586 Gene

No publications were found for GC01P040586 Gene.

No data available for External Links for GC01P040586 Gene

Products for GC01P040586 Gene

Sources for GC01P040586 Gene

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