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Aliases for GC01P040244 Gene

Subcategory (RNA class) for GC01P040244 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01P040244 Gene

No Aliases found

ORGUL Members for GC01P040244 Gene

No data available for External Ids for GC01P040244 Gene

Summaries for GC01P040244 Gene

GeneCards Summary for GC01P040244 Gene

GC01P040244 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01P040244 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01P040244 Gene

Genomics for GC01P040244 Gene

GeneHancer (GH) Regulatory Elements for GC01P040244 Gene

Promoters and enhancers for GC01P040244 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J040241 Enhancer 1 Ensembl ENCODE 600.7 -1.0 -953 4.6 MLLT1 ZNF121 CEBPG JUND CREM ZNF384 IKZF1 POLR2A PRDM10 BACH1 GC01M040241 GC01P040244 PPT1 COL9A2 SMAP2 RLF
GH01J040256 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 0.4 +14.0 13959 3.6 ZNF652 SP1 CC2D1A ZFX ELF3 SIX5 ZNF148 NKRF POLR2A MLLT1 ENSG00000259943 ZMPSTE24 PPIE EXO5 PPIEL TRIT1 RLF NFYC-AS1 NFYC PABPC4-AS1
GH01J040247 Promoter/Enhancer 1.3 EPDnew Ensembl 0.7 +4.1 4147 2 CBFA2T2 ZNF644 SMARCA4 GATAD2A SP1 SOX13 SCRT2 SOX6 ZBTB11 CREB1 TMCO2 GC01P040244 ENSG00000259943
GH01J040266 Enhancer 0.9 Ensembl ENCODE 0.3 +23.4 23401 2.7 SP1 RXRA ATF7 FOXA2 SCRT2 JUND ATF2 SCRT1 ATF3 YY1 COL9A2 ZMPSTE24 ENSG00000231296 GC01P040244
GH01J040305 Enhancer 0.9 ENCODE dbSUPER 0.2 +62.3 62258 1.9 MYC ARID2 REST CTCF CTBP1 ZFX SCRT2 RAD21 ZNF217 DPF2 PPIE TRIT1 PPIEL PABPC4-AS1 COL9A2 ENSG00000231296 GC01P040244
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P040244 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P040244 Gene

Genomic Locations for GC01P040244 Gene
chr1:40,244,054-40,306,842
(GRCh38/hg38)
Size:
62,789 bases
Orientation:
Plus strand

Genomic View for GC01P040244 Gene

Genes around GC01P040244 on UCSC Golden Path with GeneCards custom track

GC01P040244 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P040244 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P040244 Gene

Proteins for GC01P040244 Gene

Post-translational modifications for GC01P040244 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P040244 Gene

Domains & Families for GC01P040244 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P040244 Gene

Function for GC01P040244 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P040244 Gene

Localization for GC01P040244 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P040244 Gene

Pathways & Interactions for GC01P040244 Gene

PathCards logo

SuperPathways for GC01P040244 Gene

No Data Available

Interacting Proteins for GC01P040244 Gene

Gene Ontology (GO) - Biological Process for GC01P040244 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P040244 Gene

Drugs & Compounds for GC01P040244 Gene

No Compound Related Data Available

Transcripts for GC01P040244 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P040244 Gene

No ASD Table

Relevant External Links for GC01P040244 Gene

GeneLoc Exon Structure for
GC01P040244

No data available for mRNA/cDNA for GC01P040244 Gene

Expression for GC01P040244 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P040244 Gene

Orthologs for GC01P040244 Gene

No data available for Orthologs and Evolution for GC01P040244 Gene

Paralogs for GC01P040244 Gene

No data available for Paralogs for GC01P040244 Gene

Variants for GC01P040244 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P040244 Gene

Disorders for GC01P040244 Gene

No disorders were found for GC01P040244 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P040244 Gene

Publications for GC01P040244 Gene

No publications were found for GC01P040244 Gene.

No data available for External Links for GC01P040244 Gene

Products for GC01P040244 Gene

Sources for GC01P040244 Gene

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