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Aliases for GC01P040134 Gene

Subcategory (RNA class) for GC01P040134 Gene

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Quality Score for this RNA gene is

15

Aliases for GC01P040134 Gene

No Aliases found

ORGUL Members for GC01P040134 Gene

No data available for External Ids for GC01P040134 Gene

Summaries for GC01P040134 Gene

GeneCards Summary for GC01P040134 Gene

GC01P040134 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC01P040134 Gene

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

Additional gene information for GC01P040134 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01P040134 Gene

Genomics for GC01P040134 Gene

GeneHancer (GH) Regulatory Elements for GC01P040134 Gene

Promoters and enhancers for GC01P040134 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J040131 Promoter 1.1 Ensembl 600.7 -1.7 -1684 0.2 CBFA2T2 ZNF639 SMARCA4 DPF2 HDAC1 EP300 CEBPB SCRT2 JUN SOX6 ENSG00000226745 LOC728602 GC01P040134 COL9A2 PPT1 RLF SMAP2 ZMPSTE24 ENSG00000231296 EXO5
GH01J040132 Promoter 0.5 Ensembl 600.7 +0.0 16 0.8 ENSG00000226745 GC01P040134 LOC728602 PPT1 COL9A2 RLF SMAP2 ZMPSTE24 ENSG00000231296 GC01M040138
GH01J040140 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 +7.6 7577 1.2 GATAD2B CTBP1 CEBPB SP1 ZBTB17 EP300 ZNF217 DPF2 GATA3 ELF1 GC01M040138 RLF ZFP69B COL9A2 PPT1 EXO5 ZMPSTE24 ENSG00000231296 TMCO2 PPIE
GH01J040142 Enhancer 0.6 Ensembl 0.4 +9.2 9248 0.8 ZSCAN21 PRDM1 PRDM10 ZNF629 PATZ1 ZNF792 ZXDB OSR2 ZBTB17 GATA3 GC01M040138 PPT1 ZFP69B ZMPSTE24 ENSG00000231296 COL9A2 TMCO2 CAP1 GC01P040134
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P040134 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P040134 Gene

Genomic Locations for GC01P040134 Gene
chr1:40,132,985-40,133,044
(GRCh38/hg38)
Size:
60 bases
Orientation:
Plus strand

Genomic View for GC01P040134 Gene

Genes around GC01P040134 on UCSC Golden Path with GeneCards custom track

GC01P040134 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P040134 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P040134 Gene

Proteins for GC01P040134 Gene

Post-translational modifications for GC01P040134 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P040134 Gene

Domains & Families for GC01P040134 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P040134 Gene

Function for GC01P040134 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P040134 Gene

Localization for GC01P040134 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P040134 Gene

Pathways & Interactions for GC01P040134 Gene

PathCards logo

SuperPathways for GC01P040134 Gene

No Data Available

Interacting Proteins for GC01P040134 Gene

Gene Ontology (GO) - Biological Process for GC01P040134 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P040134 Gene

Drugs & Compounds for GC01P040134 Gene

No Compound Related Data Available

Transcripts for GC01P040134 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P040134 Gene

No ASD Table

Relevant External Links for GC01P040134 Gene

GeneLoc Exon Structure for
GC01P040134

No data available for mRNA/cDNA for GC01P040134 Gene

Expression for GC01P040134 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P040134 Gene

Orthologs for GC01P040134 Gene

No data available for Orthologs and Evolution for GC01P040134 Gene

Paralogs for GC01P040134 Gene

No data available for Paralogs for GC01P040134 Gene

Variants for GC01P040134 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P040134 Gene

Disorders for GC01P040134 Gene

No disorders were found for GC01P040134 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P040134 Gene

Publications for GC01P040134 Gene

  1. Identification of a new antizyme mRNA +1 frameshifting stimulatory pseudoknot in a subset of diverse invertebrates and its apparent absence in intermediate species. (PMID: 15147837) Ivanov IP … Atkins JF (Journal of molecular biology 2004) 1

No data available for External Links for GC01P040134 Gene

Products for GC01P040134 Gene

Sources for GC01P040134 Gene

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