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Aliases for GC01P030805 Gene

Subcategory (RNA class) for GC01P030805 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01P030805 Gene

No Aliases found

ORGUL Members for GC01P030805 Gene

No data available for External Ids for GC01P030805 Gene

Summaries for GC01P030805 Gene

GeneCards Summary for GC01P030805 Gene

GC01P030805 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01P030805 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01P030805 Gene

Genomics for GC01P030805 Gene

GeneHancer (GH) Regulatory Elements for GC01P030805 Gene

Promoters and enhancers for GC01P030805 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J030804 Enhancer 0.7 ENCODE dbSUPER 600.7 +0.7 694 0.2 PTBP1 BCOR ZNF143 KDM1A ZMYM3 SMARCA5 GC01P030805 SDC3 LOC400748 ENSG00000229607
GH01J030803 Enhancer 0.6 dbSUPER 600.7 -0.6 -646 1.1 PRDM1 REST ZBTB17 ZFHX2 BCOR GLIS1 ZMYM3 KDM1A EGR2 GC01P030805 SDC3 LOC400748 MATN1 MATN1-AS1 PUM1 LOC105378621
GH01J030801 Enhancer 1 ENCODE dbSUPER 0.7 -2.4 -2436 0.2 CC2D1A CTCF ZNF148 RAD21 ARID2 ZBTB8A ATF1 ZNF143 REST TRIM22 SDC3 LAPTM5 LOC400748 MATN1 MATN1-AS1 GC01P030805 LOC105378621
GH01J030790 Promoter/Enhancer 1.3 EPDnew Ensembl 0.4 -13.0 -12954 2 IKZF1 MCM2 PRDM1 ZNF680 MTA1 ZNF300 IKZF2 ZNF512 ZNF776 MTA2 LAPTM5 ENSG00000229447 SNRNP40 PUM1 SDC3 COL16A1 MATN1 MATN1-AS1 ENSG00000235790 LOC400748
GH01J030808 Enhancer 1.1 ENCODE dbSUPER 0.4 +5.3 5293 3.2 ZSCAN21 YY1 PRDM1 EGR1 ZNF639 SMARCA4 GMEB1 POLR2A IKZF1 ZBTB8A SDC3 LOC400748 MATN1 MATN1-AS1 GC01P030805 ENSG00000229607
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P030805 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P030805 Gene

Genomic Locations for GC01P030805 Gene
chr1:30,804,355-30,807,489
(GRCh38/hg38)
Size:
3,135 bases
Orientation:
Plus strand

Genomic View for GC01P030805 Gene

Genes around GC01P030805 on UCSC Golden Path with GeneCards custom track

GC01P030805 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P030805 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P030805 Gene

Proteins for GC01P030805 Gene

Post-translational modifications for GC01P030805 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P030805 Gene

Domains & Families for GC01P030805 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P030805 Gene

Function for GC01P030805 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P030805 Gene

Localization for GC01P030805 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P030805 Gene

Pathways & Interactions for GC01P030805 Gene

PathCards logo

SuperPathways for GC01P030805 Gene

No Data Available

Interacting Proteins for GC01P030805 Gene

Gene Ontology (GO) - Biological Process for GC01P030805 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P030805 Gene

Drugs & Compounds for GC01P030805 Gene

No Compound Related Data Available

Transcripts for GC01P030805 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P030805 Gene

No ASD Table

Relevant External Links for GC01P030805 Gene

GeneLoc Exon Structure for
GC01P030805

No data available for mRNA/cDNA for GC01P030805 Gene

Expression for GC01P030805 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P030805 Gene

Orthologs for GC01P030805 Gene

No data available for Orthologs and Evolution for GC01P030805 Gene

Paralogs for GC01P030805 Gene

No data available for Paralogs for GC01P030805 Gene

Variants for GC01P030805 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P030805 Gene

Disorders for GC01P030805 Gene

No disorders were found for GC01P030805 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P030805 Gene

Publications for GC01P030805 Gene

No publications were found for GC01P030805 Gene.

No data available for External Links for GC01P030805 Gene

Products for GC01P030805 Gene

Sources for GC01P030805 Gene

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