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Aliases for GC01P027602 Gene

Subcategory (RNA class) for GC01P027602 Gene


Quality Score for this RNA gene is


Aliases for GC01P027602 Gene

No Aliases found

ORGUL Members for GC01P027602 Gene

No data available for External Ids for GC01P027602 Gene

Summaries for GC01P027602 Gene

GeneCards Summary for GC01P027602 Gene

GC01P027602 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC01P027602 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC01P027602

Additional gene information for GC01P027602 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01P027602 Gene

Genomics for GC01P027602 Gene

GeneHancer (GH) Regulatory Elements for GC01P027602 Gene

Promoters and enhancers for GC01P027602 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J027596 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -1.1 -1068 8.6 SP1 MNT SIX5 ZNF148 NKRF MLLT1 POLR2A GTF2F1 ZSCAN21 NCOA3 GC01P027602 GPN2 ARID1A ACTG1P20 ENSG00000260063 FAM76A DNAJC8 EYA3 PIGV RCC1
GH01J027588 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.7 -9691 8.6 ZNF473 SP1 ZBTB7A SP7 MLLT1 IKZF1 GLIS2 PKNOX1 ZBTB8A ZBTB33 ACTG1P20 DNAJC8 EYA3 GPN2 FAM76A ARID1A ENSG00000260063 TMEM222 RNU6-48P PPP1R8
GH01J027559 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -33.2 -33176 19.1 ZNF652 SP1 ZFX CTCF ELF3 ZNF148 NKRF MLLT1 CEBPG RERE ARID1A ACTG1P20 TRNAU1AP NPM1P39 EYA3 MAP3K6 AHDC1 ENSG00000231344 WASF2 GPATCH3
GH01J027581 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -18.4 -18402 5.7 ZNF652 ELF3 CEBPG SP1 PPARG ZNF384 RXRA ZBTB33 ZNF600 PRDM10 ENSG00000224311 WDTC1 RPA2 GC01P027602 AHDC1 ENSG00000237429
GH01J027554 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.3 -45.7 -45719 5 CC2D1A CTCF ZNF148 ZNF121 NCOA3 MAFK TFE3 TRIM24 ELF1 SP1 AHDC1 WASF2 ACTG1P20 RNU6-48P TMEM222 CD164L2 ENSG00000237429 GC01P027602
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P027602 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P027602 Gene

Genomic Locations for GC01P027602 Gene
708 bases
Plus strand

Genomic View for GC01P027602 Gene

Genes around GC01P027602 on UCSC Golden Path with GeneCards custom track

GC01P027602 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P027602 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01P027602 Gene

ORGUL Member Location for GC01P027602 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P027602 Gene

Proteins for GC01P027602 Gene

Post-translational modifications for GC01P027602 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P027602 Gene

Domains & Families for GC01P027602 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P027602 Gene

Function for GC01P027602 Gene

Phenotypes From GWAS Catalog for GC01P027602 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P027602 Gene

Localization for GC01P027602 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P027602 Gene

Pathways & Interactions for GC01P027602 Gene

PathCards logo

SuperPathways for GC01P027602 Gene

No Data Available

Interacting Proteins for GC01P027602 Gene

Gene Ontology (GO) - Biological Process for GC01P027602 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC01P027602 Gene

Drugs & Compounds for GC01P027602 Gene

No Compound Related Data Available

Transcripts for GC01P027602 Gene

fRNAdb Secondary structures for GC01P027602 Gene

  • FR313023

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P027602 Gene

No ASD Table

Relevant External Links for GC01P027602 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC01P027602 Gene

Expression for GC01P027602 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P027602 Gene

Orthologs for GC01P027602 Gene

No data available for Orthologs and Evolution for GC01P027602 Gene

Paralogs for GC01P027602 Gene

No data available for Paralogs for GC01P027602 Gene

Variants for GC01P027602 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P027602 Gene

Disorders for GC01P027602 Gene

No disorders were found for GC01P027602 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P027602 Gene

Publications for GC01P027602 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for GC01P027602 Gene

Products for GC01P027602 Gene

Sources for GC01P027602 Gene

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