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Aliases for GC01P021743 Gene

Subcategory (RNA class) for GC01P021743 Gene

snRNA

Quality Score for this RNA gene is

15

Aliases for GC01P021743 Gene

No Aliases found

ORGUL Members for GC01P021743 Gene

No data available for External Ids for GC01P021743 Gene

Summaries for GC01P021743 Gene

GeneCards Summary for GC01P021743 Gene

GC01P021743 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC01P021743 Gene

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

Additional gene information for GC01P021743 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01P021743 Gene

Genomics for GC01P021743 Gene

GeneHancer (GH) Regulatory Elements for GC01P021743 Gene

Promoters and enhancers for GC01P021743 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J021668 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.2 -71.7 -71748 2.9 ZFX ELF3 MNT NKRF MLLT1 BACH1 TFE3 ZBTB7A SP7 SP1 RAP1GAP HP1BP3 ZBTB40 USP48 NBPF3 GC01P021743
GH01J021748 Enhancer 0.9 dbSUPER 0.4 +8.7 8685 1.8 ZFX CC2D1A CBFA2T2 ZNF148 TRIM24 ZNF639 EGR1 SMARCA4 MTA1 GMEB1 USP48 LDLRAD2 HSPG2 GC01P021743 ENSG00000231978
GH01J021760 Enhancer 1.1 ENCODE dbSUPER 0.3 +22.4 22396 6.6 NKRF ZSCAN21 SP7 MLLT1 ZNF639 EGR1 SMARCA4 MTA1 IKZF1 POLR2A USP48 ENSG00000231978 GC01P021743
GH01J021675 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.2 -64.8 -64820 1.1 CC2D1A ZKSCAN8 CBFA2T2 ZNF148 MLLT1 GTF2F1 CDC5L TRIM24 EGR1 SMARCA4 USP48 HSPG2 RAP1GAP GC01P021743
GH01J021702 Enhancer 1 Ensembl ENCODE 0.3 -37.5 -37520 1.5 CTCF MLLT1 TRIM24 IKZF1 CEBPA REST PKNOX1 ZNF316 EP300 SOX6 RAP1GAP USP48 GC01P021743
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P021743 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P021743 Gene

Genomic Locations for GC01P021743 Gene
chr1:21,741,151-21,741,195
(GRCh38/hg38)
Size:
45 bases
Orientation:
Plus strand

Genomic View for GC01P021743 Gene

Genes around GC01P021743 on UCSC Golden Path with GeneCards custom track

GC01P021743 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P021743 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P021743 Gene

Proteins for GC01P021743 Gene

Post-translational modifications for GC01P021743 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P021743 Gene

Domains & Families for GC01P021743 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P021743 Gene

Function for GC01P021743 Gene

Phenotypes From GWAS Catalog for GC01P021743 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P021743 Gene

Localization for GC01P021743 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P021743 Gene

Pathways & Interactions for GC01P021743 Gene

PathCards logo

SuperPathways for GC01P021743 Gene

No Data Available

Interacting Proteins for GC01P021743 Gene

Gene Ontology (GO) - Biological Process for GC01P021743 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P021743 Gene

Drugs & Compounds for GC01P021743 Gene

No Compound Related Data Available

Transcripts for GC01P021743 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P021743 Gene

No ASD Table

Relevant External Links for GC01P021743 Gene

GeneLoc Exon Structure for
GC01P021743

No data available for mRNA/cDNA for GC01P021743 Gene

Expression for GC01P021743 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P021743 Gene

Orthologs for GC01P021743 Gene

No data available for Orthologs and Evolution for GC01P021743 Gene

Paralogs for GC01P021743 Gene

No data available for Paralogs for GC01P021743 Gene

Variants for GC01P021743 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P021743 Gene

Disorders for GC01P021743 Gene

No disorders were found for GC01P021743 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P021743 Gene

Publications for GC01P021743 Gene

  1. 3' end processing of mouse histone pre-mRNA: evidence for additional base-pairing between U7 snRNA and pre-mRNA. (PMID: 7937126) Spycher C … Schümperli D (Nucleic acids research 1994) 1
  2. Identification of the human U7 snRNP as one of several factors involved in the 3' end maturation of histone premessenger RNA's. (PMID: 2825355) Mowry KL … Steitz JA (Science (New York, N.Y.) 1987) 1

No data available for External Links for GC01P021743 Gene

Products for GC01P021743 Gene

Sources for GC01P021743 Gene

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