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Aliases for GC01P021551 Gene

Subcategory (RNA class) for GC01P021551 Gene

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Quality Score for this RNA gene is

19

Aliases for GC01P021551 Gene

No Aliases found

ORGUL Members for GC01P021551 Gene

No data available for External Ids for GC01P021551 Gene

Summaries for GC01P021551 Gene

GeneCards Summary for GC01P021551 Gene

GC01P021551 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC01P021551 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC01P021551

Additional gene information for GC01P021551 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01P021551 Gene

Genomics for GC01P021551 Gene

GeneHancer (GH) Regulatory Elements for GC01P021551 Gene

Promoters and enhancers for GC01P021551 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J021550 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 +1.4 1360 5.6 SP1 RXRA RNF2 ZNF512 REST PKNOX1 FOXA2 SCRT2 JUND YY1 ALPL GC01P021551 GC01P021552 LINC02596 RAP1GAP ENSG00000236936 NBPF2P ECE1 EIF4G3
GH01J021508 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 0.3 -40.6 -40648 4.3 ZNF652 SP1 CTCF MLLT1 MCM2 ZBTB7A SP7 IKZF1 PRDM10 ATF1 ALPL GC01P021509 GC01P021510 NBPF2P GC01P021551 GC01P021552
GH01J021545 Enhancer 0.7 Ensembl 0.7 -4.6 -4616 2.8 ZKSCAN8 SP1 RXRA CEBPA FOXA2 CEBPB JUND ATF3 YY1 ZBTB33 ALPL RAP1GAP ECE1 USP48 NBPF3 GC01P021551 GC01P021552 GC01P021509 GC01P021510
GH01J021573 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +23.6 23584 2.8 CTCF RAD21 EGR1 ZIC2 REST ZEB2 POLR2A ZNF561 ZBTB44 CTBP1 ZBTB40 CDC42-IT1 ENSG00000271428 HSPG2 DDOST ALPL LDLRAD2 USP48 HP1BP3 LINC02596
GH01J021586 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +32.7 32684 9 ELF3 AHR MCM2 MAFK TFE3 SP7 SP5 ZNF644 EGR1 KAT8 LINC02596 RAP1GAP GC01P021551 GC01P021552
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P021551 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P021551 Gene

Genomic Locations for GC01P021551 Gene
chr1:21,551,217-21,551,289
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand

Genomic View for GC01P021551 Gene

Genes around GC01P021551 on UCSC Golden Path with GeneCards custom track

GC01P021551 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P021551 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01P021551 Gene

ORGUL Member Location for GC01P021551 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P021551 Gene

Proteins for GC01P021551 Gene

Post-translational modifications for GC01P021551 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P021551 Gene

Domains & Families for GC01P021551 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P021551 Gene

Function for GC01P021551 Gene

Phenotypes From GWAS Catalog for GC01P021551 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P021551 Gene

Localization for GC01P021551 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P021551 Gene

Pathways & Interactions for GC01P021551 Gene

PathCards logo

SuperPathways for GC01P021551 Gene

No Data Available

Interacting Proteins for GC01P021551 Gene

Gene Ontology (GO) - Biological Process for GC01P021551 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P021551 Gene

Drugs & Compounds for GC01P021551 Gene

No Compound Related Data Available

Transcripts for GC01P021551 Gene

fRNAdb Secondary structures for GC01P021551 Gene

  • FR259454

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P021551 Gene

No ASD Table

Relevant External Links for GC01P021551 Gene

GeneLoc Exon Structure for
GC01P021551

No data available for mRNA/cDNA for GC01P021551 Gene

Expression for GC01P021551 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P021551 Gene

Orthologs for GC01P021551 Gene

No data available for Orthologs and Evolution for GC01P021551 Gene

Paralogs for GC01P021551 Gene

No data available for Paralogs for GC01P021551 Gene

Variants for GC01P021551 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P021551 Gene

Disorders for GC01P021551 Gene

No disorders were found for GC01P021551 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P021551 Gene

Publications for GC01P021551 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

No data available for External Links for GC01P021551 Gene

Products for GC01P021551 Gene

Sources for GC01P021551 Gene

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