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Aliases for GC01P006262 Gene

Subcategory (RNA class) for GC01P006262 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01P006262 Gene

No Aliases found

ORGUL Members for GC01P006262 Gene

No data available for External Ids for GC01P006262 Gene

Summaries for GC01P006262 Gene

GeneCards Summary for GC01P006262 Gene

GC01P006262 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01P006262 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01P006262 Gene

Genomics for GC01P006262 Gene

GeneHancer (GH) Regulatory Elements for GC01P006262 Gene

Promoters and enhancers for GC01P006262 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J006260 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.5 526 4.9 CEBPG AHR ZBTB7A YY1 SP7 SP1 SP5 CREM ZNF639 EGR1 GPR153 GC01P006262 ICMT LINC00337 RPL22 LOC102724450 RNF207 CHD5 NOL9 THAP3
GH01J006268 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +10.1 10069 6 ZNF148 SP7 EGR1 ZNF547 GLIS2 PKNOX1 ZBTB8A ZNF600 PRDM10 ZIC2 ESPN CHD5 GC01P006262 ACOT7 ENSG00000271746
GH01J006290 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +29.8 29763 2.6 SP1 ZNF687 RELA CREM IKZF1 BACH1 IKZF2 SMAD5 CBFB DPF2 ESPN ACOT7 ZBTB48 GPR153 GC01P006262 ENSG00000271746
GH01J006275 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 0.4 +15.3 15284 2.1 GLIS2 ZNF600 POLR2A MNT MEF2D ZNF189 WT1 KLF17 BHLHE40 L3MBTL2 ESPN RNF207 GPR153 ZBTB48 PHF13 ACOT7 GC01P006262 ENSG00000271746
GH01J006281 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.3 +20.9 20858 2.1 ELF3 SP5 ZNF644 ATF1 ZNF341 CTCF CTBP1 SAP130 ZFHX2 SKIL ACOT7 GPR153 GC01P006262 ENSG00000271746
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P006262 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P006262 Gene

Genomic Locations for GC01P006262 Gene
chr1:6,261,332-6,404,118
(GRCh38/hg38)
Size:
142,787 bases
Orientation:
Plus strand

Genomic View for GC01P006262 Gene

Genes around GC01P006262 on UCSC Golden Path with GeneCards custom track

GC01P006262 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P006262 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P006262 Gene

Proteins for GC01P006262 Gene

Post-translational modifications for GC01P006262 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P006262 Gene

Domains & Families for GC01P006262 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P006262 Gene

Function for GC01P006262 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P006262 Gene

Localization for GC01P006262 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P006262 Gene

Pathways & Interactions for GC01P006262 Gene

PathCards logo

SuperPathways for GC01P006262 Gene

No Data Available

Interacting Proteins for GC01P006262 Gene

Gene Ontology (GO) - Biological Process for GC01P006262 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P006262 Gene

Drugs & Compounds for GC01P006262 Gene

No Compound Related Data Available

Transcripts for GC01P006262 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P006262 Gene

No ASD Table

Relevant External Links for GC01P006262 Gene

GeneLoc Exon Structure for
GC01P006262

No data available for mRNA/cDNA for GC01P006262 Gene

Expression for GC01P006262 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P006262 Gene

Orthologs for GC01P006262 Gene

No data available for Orthologs and Evolution for GC01P006262 Gene

Paralogs for GC01P006262 Gene

No data available for Paralogs for GC01P006262 Gene

Variants for GC01P006262 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P006262 Gene

Disorders for GC01P006262 Gene

No disorders were found for GC01P006262 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P006262 Gene

Publications for GC01P006262 Gene

No publications were found for GC01P006262 Gene.

No data available for External Links for GC01P006262 Gene

Products for GC01P006262 Gene

Sources for GC01P006262 Gene

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