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Aliases for GC01P001590 Gene

Subcategory (RNA class) for GC01P001590 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01P001590 Gene

No Aliases found

ORGUL Members for GC01P001590 Gene

No data available for External Ids for GC01P001590 Gene

Summaries for GC01P001590 Gene

GeneCards Summary for GC01P001590 Gene

GC01P001590 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01P001590 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01P001590 Gene

Genomics for GC01P001590 Gene

GeneHancer (GH) Regulatory Elements for GC01P001590 Gene

Promoters and enhancers for GC01P001590 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J001591 Enhancer 0.6 Ensembl 600.7 +1.1 1139 0.6 PRDM1 ZNF600 ZIC2 ZNF629 OSR2 ATF2 HIC1 ZNF24 ZBTB33 GC01P001590 SLC35E2B ENSG00000227775 FNDC10
GH01J001613 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.3 +24.8 24828 4 SP1 ZFX MNT SIX5 CBFA2T2 NKRF POLR2A MLLT1 CEBPG GTF2F1 ENSG00000272106 GC01M001681 MIB2 SLC35E2B ATAD3B ENSG00000227775 SLC35E2A INTS11 LINC01409 LINC00115
GH01J001596 Promoter/Enhancer 1.3 Ensembl ENCODE 0.4 +7.1 7064 1.4 ZNF148 AHR SMARCA4 GLIS2 ZBTB33 DPF2 IKZF1 ZNF600 ZIC2 ZNF740 SLC35E2B ANKRD65 FNDC10 GC01P001590
GH01J001599 Promoter 1.1 Ensembl 0.4 +9.6 9639 2 ZFX MYC ZNF639 NRF1 REST LARP7 POLR2A FUS CTCF EZH2 FNDC10 LOC105378586 ENSG00000227775 INTS11 SLC35E2A ATAD3B LINC01409 LINC00115 MORN1 ENSG00000240731
GH01J001620 Enhancer 0.8 ENCODE dbSUPER 0.3 +29.7 29714 0.2 CTCF SP1 REST NFIC HNF4A HIC1 ARID4B ZBTB33 BCL11B RAD21 ENSG00000272106 MIB2 MMP23B GC01P001590
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01P001590 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01P001590 Gene

Genomic Locations for GC01P001590 Gene
chr1:1,590,562-1,622,417
(GRCh38/hg38)
Size:
31,856 bases
Orientation:
Plus strand

Genomic View for GC01P001590 Gene

Genes around GC01P001590 on UCSC Golden Path with GeneCards custom track

GC01P001590 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01P001590 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01P001590 Gene

Proteins for GC01P001590 Gene

Post-translational modifications for GC01P001590 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01P001590 Gene

Domains & Families for GC01P001590 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01P001590 Gene

Function for GC01P001590 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01P001590 Gene

Localization for GC01P001590 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01P001590 Gene

Pathways & Interactions for GC01P001590 Gene

PathCards logo

SuperPathways for GC01P001590 Gene

No Data Available

Interacting Proteins for GC01P001590 Gene

Gene Ontology (GO) - Biological Process for GC01P001590 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01P001590 Gene

Drugs & Compounds for GC01P001590 Gene

No Compound Related Data Available

Transcripts for GC01P001590 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01P001590 Gene

No ASD Table

Relevant External Links for GC01P001590 Gene

GeneLoc Exon Structure for
GC01P001590

No data available for mRNA/cDNA for GC01P001590 Gene

Expression for GC01P001590 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01P001590 Gene

Orthologs for GC01P001590 Gene

No data available for Orthologs and Evolution for GC01P001590 Gene

Paralogs for GC01P001590 Gene

No data available for Paralogs for GC01P001590 Gene

Variants for GC01P001590 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01P001590 Gene

Disorders for GC01P001590 Gene

No disorders were found for GC01P001590 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01P001590 Gene

Publications for GC01P001590 Gene

No publications were found for GC01P001590 Gene.

No data available for External Links for GC01P001590 Gene

Products for GC01P001590 Gene

Sources for GC01P001590 Gene

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