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Aliases for GC01M246427 Gene

Subcategory (RNA class) for GC01M246427 Gene


Quality Score for this RNA gene is


Aliases for GC01M246427 Gene

No Aliases found

ORGUL Members for GC01M246427 Gene

No data available for External Ids for GC01M246427 Gene

Summaries for GC01M246427 Gene

GeneCards Summary for GC01M246427 Gene

GC01M246427 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC01M246427 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M246427 Gene

Genomics for GC01M246427 Gene

GeneHancer (GH) Regulatory Elements for GC01M246427 Gene

Promoters and enhancers for GC01M246427 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J246425 Enhancer 1.3 FANTOM5 Ensembl ENCODE 600.7 +0.6 618 1 CC2D1A CBFA2T2 MLLT1 TRIM24 EGR1 SMARCA4 MTA1 DPF2 IKZF1 ATF1 ENSG00000207326 GC01M246427 SMYD3 SMYD3-IT1
GH01J246427 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.7 -2.6 -2556 2.2 CC2D1A MLLT1 BACH1 TRIM24 SMARCA4 POLR2A REST ZNF24 ZNF740 HDAC1 SMYD3 ENSG00000207326 GC01M246427
GH01J246506 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.2 -80.8 -80781 3 CC2D1A POLR2A MLLT1 ZNF687 NCOA6 TRIM24 EGR1 CREB1 GLIS2 GMEB1 SMYD3 ZNF669 ZNF496 ZNF670-ZNF695 AHCTF1 CNST ENSG00000227728 TFB2M ENSG00000207326 GC01M246427
GH01J246434 Enhancer 0.7 Ensembl ENCODE 0.4 -10.2 -10181 3 SP1 IKZF1 IKZF2 CEBPB USF1 MLLT1 REST SMYD3 ENSG00000207326 GC01M246427
GH01J246417 Enhancer 0.6 Ensembl ENCODE 0.4 +8.6 8619 1 FOS CBX5 JUND GC01M246427 ENSG00000207326 SMYD3 SMYD3-IT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M246427 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M246427 Gene

Genomic Locations for GC01M246427 Gene
113 bases
Minus strand

Genomic View for GC01M246427 Gene

Genes around GC01M246427 on UCSC Golden Path with GeneCards custom track

GC01M246427 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M246427 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M246427 Gene

Proteins for GC01M246427 Gene

Post-translational modifications for GC01M246427 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M246427 Gene

Domains & Families for GC01M246427 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M246427 Gene

Function for GC01M246427 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M246427 Gene

Localization for GC01M246427 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M246427 Gene

Pathways & Interactions for GC01M246427 Gene

PathCards logo

SuperPathways for GC01M246427 Gene

No Data Available

Interacting Proteins for GC01M246427 Gene

Gene Ontology (GO) - Biological Process for GC01M246427 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC01M246427 Gene

Drugs & Compounds for GC01M246427 Gene

No Compound Related Data Available

Transcripts for GC01M246427 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M246427 Gene

No ASD Table

Relevant External Links for GC01M246427 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC01M246427 Gene

Expression for GC01M246427 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M246427 Gene

Orthologs for GC01M246427 Gene

No data available for Orthologs and Evolution for GC01M246427 Gene

Paralogs for GC01M246427 Gene

No data available for Paralogs for GC01M246427 Gene

Variants for GC01M246427 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M246427 Gene

Disorders for GC01M246427 Gene

No disorders were found for GC01M246427 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M246427 Gene

Publications for GC01M246427 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

No data available for External Links for GC01M246427 Gene

Products for GC01M246427 Gene

Sources for GC01M246427 Gene

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