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Aliases for GC01M235000 Gene

Subcategory (RNA class) for GC01M235000 Gene

antisense

Quality Score for this RNA gene is

15

Aliases for GC01M235000 Gene

No Aliases found

ORGUL Members for GC01M235000 Gene

No data available for External Ids for GC01M235000 Gene

Summaries for GC01M235000 Gene

GeneCards Summary for GC01M235000 Gene

GC01M235000 is an RNA Gene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for GC01M235000 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

Additional gene information for GC01M235000 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M235000 Gene

Genomics for GC01M235000 Gene

GeneHancer (GH) Regulatory Elements for GC01M235000 Gene

Promoters and enhancers for GC01M235000 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J235034 Enhancer 1 Ensembl ENCODE dbSUPER 600.7 -0.6 -592 0.9 ZNF687 IKZF1 IKZF2 ZSCAN4 PKNOX1 HDAC1 RUNX3 KDM1A PRDM10 GC01M235000 LINC01348
GH01J235033 Enhancer 0.2 Ensembl 600.7 +0.7 668 0.8 GC01M235000 GC01P235015
GH01J235045 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -14.9 -14932 8.4 SP1 CBFA2T2 ZNF148 MLLT1 ZNF121 ZNF687 ZSCAN21 SP7 RELA CREM ARID4B RPS21P1 IRF2BP2 GC01M235000 LINC01348
GH01J235010 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.3 +22.2 22248 4.4 SP1 CBFA2T2 NKRF MLLT1 GTF2F1 ZNF687 ZSCAN21 MAFK JUND YY1 ARID4B IRF2BP2 RPS21P1 LDHAP2 RBM34 GC01P235007 GC01P235015 GC01M235000
GH01J235021 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +11.1 11068 4.4 ZFX ZNF687 RELA SP1 CREM ZNF560 IKZF1 PKNOX1 RXRA IKZF2 GC01P235015 GC01M235000
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M235000 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M235000 Gene

Genomic Locations for GC01M235000 Gene
chr1:235,000,459-235,034,469
(GRCh38/hg38)
Size:
34,011 bases
Orientation:
Minus strand

Genomic View for GC01M235000 Gene

Genes around GC01M235000 on UCSC Golden Path with GeneCards custom track

GC01M235000 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M235000 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01M235000 Gene

ORGUL Member Location for GC01M235000 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M235000 Gene

Proteins for GC01M235000 Gene

Post-translational modifications for GC01M235000 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M235000 Gene

Domains & Families for GC01M235000 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M235000 Gene

Function for GC01M235000 Gene

Phenotypes From GWAS Catalog for GC01M235000 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M235000 Gene

Localization for GC01M235000 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M235000 Gene

Pathways & Interactions for GC01M235000 Gene

PathCards logo

SuperPathways for GC01M235000 Gene

No Data Available

Interacting Proteins for GC01M235000 Gene

Gene Ontology (GO) - Biological Process for GC01M235000 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M235000 Gene

Drugs & Compounds for GC01M235000 Gene

No Compound Related Data Available

Transcripts for GC01M235000 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M235000 Gene

No ASD Table

Relevant External Links for GC01M235000 Gene

GeneLoc Exon Structure for
GC01M235000

No data available for mRNA/cDNA for GC01M235000 Gene

Expression for GC01M235000 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M235000 Gene

Orthologs for GC01M235000 Gene

No data available for Orthologs and Evolution for GC01M235000 Gene

Paralogs for GC01M235000 Gene

No data available for Paralogs for GC01M235000 Gene

Variants for GC01M235000 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M235000 Gene

Disorders for GC01M235000 Gene

No disorders were found for GC01M235000 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M235000 Gene

Publications for GC01M235000 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC01M235000 Gene

Products for GC01M235000 Gene

Sources for GC01M235000 Gene

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