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Aliases for GC01M228883 Gene

Subcategory (RNA class) for GC01M228883 Gene


Quality Score for this RNA gene is


Aliases for GC01M228883 Gene

No Aliases found

No data available for External Ids for GC01M228883 Gene

Summaries for GC01M228883 Gene

GeneCards Summary for GC01M228883 Gene

GC01M228883 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC01M228883 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

Additional gene information for GC01M228883 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M228883 Gene

Genomics for GC01M228883 Gene

GeneHancer (GH) Regulatory Elements for GC01M228883 Gene

Promoters and enhancers for GC01M228883 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J228802 Enhancer 0.8 Ensembl ENCODE 600.7 +0.3 288 2.2 SP1 RXRA CEBPA JUND YY1 ZNF792 NR2F2 TCF7L2 RAD21 HNF4A GC01M228883 RNU6-180P LOC100421842
GH01J228801 Enhancer 0.6 Ensembl 600.7 +1.9 1888 0.2 ZNF652 CEBPG TEAD1 SMC3 CEBPB FEZF1 NFIA TEAD3 GC01M228883 TMEM78 ACTA1 LOC100421842
GH01J228807 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.9 -7855 5.9 YY1 SP1 ZNF680 RXRA ZBTB33 RFX1 CTBP1 ZNF10 JUND ZNF662 CICP26 NUP133 C1orf35 URB2 HIST3H3 HMGN2P19 BTNL10 ENSG00000269890 RNU6-180P ENSG00000271399
GH01J228781 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +20.0 20022 3.9 ZNF473 ELF3 ZNF121 CEBPG ZSCAN21 CDC5L MAFK ZBTB7A YY1 SP7 NUP133 CICP26 C1orf35 ENSG00000269890 HMGN2P19 HIST3H3 ABCB10 TAF5L URB2 MRPL55
GH01J228804 Enhancer 0.8 ENCODE dbSUPER 0.7 -2.1 -2063 1.1 ZIC2 ZNF561 SCRT2 ZSCAN5C OSR2 ATF2 ZNF580 SCRT1 ZNF335 FEZF1 RNU6-180P GC01M228883 ENSG00000271399
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M228883 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M228883 Gene

Genomic Locations for GC01M228883 Gene
5,955 bases
Minus strand

Genomic View for GC01M228883 Gene

Genes around GC01M228883 on UCSC Golden Path with GeneCards custom track

GC01M228883 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M228883 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01M228883 Gene

ORGUL Member Location for GC01M228883 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M228883 Gene

Proteins for GC01M228883 Gene

Post-translational modifications for GC01M228883 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M228883 Gene

Domains & Families for GC01M228883 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M228883 Gene

Function for GC01M228883 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M228883 Gene

Localization for GC01M228883 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M228883 Gene

Pathways & Interactions for GC01M228883 Gene

PathCards logo

SuperPathways for GC01M228883 Gene

No Data Available

Interacting Proteins for GC01M228883 Gene

Gene Ontology (GO) - Biological Process for GC01M228883 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC01M228883 Gene

Drugs & Compounds for GC01M228883 Gene

No Compound Related Data Available

Transcripts for GC01M228883 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M228883 Gene

No ASD Table

Relevant External Links for GC01M228883 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC01M228883 Gene

Expression for GC01M228883 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M228883 Gene

Orthologs for GC01M228883 Gene

No data available for Orthologs and Evolution for GC01M228883 Gene

Paralogs for GC01M228883 Gene

No data available for Paralogs for GC01M228883 Gene

Variants for GC01M228883 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M228883 Gene

Disorders for GC01M228883 Gene

No disorders were found for GC01M228883 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M228883 Gene

Publications for GC01M228883 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC01M228883 Gene

Products for GC01M228883 Gene

Sources for GC01M228883 Gene

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