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Aliases for GC01M226196 Gene

Subcategory (RNA class) for GC01M226196 Gene

SRP

Quality Score for this RNA gene is

15

Aliases for GC01M226196 Gene

No Aliases found

ORGUL Members for GC01M226196 Gene

No data available for External Ids for GC01M226196 Gene

Summaries for GC01M226196 Gene

GeneCards Summary for GC01M226196 Gene

GC01M226196 is an RNA Gene, and is affiliated with the SRP RNA class.

Additional gene information for GC01M226196 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M226196 Gene

Genomics for GC01M226196 Gene

GeneHancer (GH) Regulatory Elements for GC01M226196 Gene

Promoters and enhancers for GC01M226196 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J226197 Enhancer 1 Ensembl ENCODE 600.7 -0.4 -352 0.7 HDGF CC2D1A CTCF ZNF121 RAD21 KAT8 GATAD2A ZNF143 REST TRIM22 GC01M226196 MIXL1 ACBD3-AS1 LIN9 PARP1 LOC101927247
GH01J226195 Enhancer 0.5 Ensembl 600.7 +1.5 1476 0.2 PATZ1 CTBP1 ZBTB48 ZBTB17 GATA3 ZNF621 GC01M226196 MIXL1 ACBD3-AS1 LIN9 RPL34P7 LOC101927247
GH01J226199 Enhancer 0.9 Ensembl 0.7 -3.2 -3224 0.8 MCM2 ZNF404 ZNF680 ZNF560 MTA1 IKZF1 ZBTB8A PRDM12 ZNF512 ZNF639 ACBD3 ACBD3-AS1 H3F3A MIXL1 LINC02765 LIN9 ENSG00000272562 PARP1 GC01M226196 LOC101927247
GH01J226201 Enhancer 0.5 FANTOM5 0.7 -4.4 -4370 0.1 CTCF RAD21 REST ZNF654 ADNP MIXL1 ACBD3-AS1 LIN9 PARP1 LEFTY1 GC01M226196 LOC101927247
GH01J226202 Enhancer 0.5 Ensembl 0.7 -4.7 -4723 0.2 REST RBAK CTCF ZNF654 ACBD3-AS1 LIN9 ACBD3 PARP1 H3F3A GC01M226196 LOC101927247 MIXL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M226196 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M226196 Gene

Genomic Locations for GC01M226196 Gene
chr1:226,196,495-226,196,777
(GRCh38/hg38)
Size:
283 bases
Orientation:
Minus strand

Genomic View for GC01M226196 Gene

Genes around GC01M226196 on UCSC Golden Path with GeneCards custom track

GC01M226196 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M226196 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M226196 Gene

Proteins for GC01M226196 Gene

Post-translational modifications for GC01M226196 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M226196 Gene

Domains & Families for GC01M226196 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M226196 Gene

Function for GC01M226196 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M226196 Gene

Localization for GC01M226196 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M226196 Gene

Pathways & Interactions for GC01M226196 Gene

PathCards logo

SuperPathways for GC01M226196 Gene

No Data Available

Interacting Proteins for GC01M226196 Gene

Gene Ontology (GO) - Biological Process for GC01M226196 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M226196 Gene

Drugs & Compounds for GC01M226196 Gene

No Compound Related Data Available

Transcripts for GC01M226196 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M226196 Gene

No ASD Table

Relevant External Links for GC01M226196 Gene

GeneLoc Exon Structure for
GC01M226196

No data available for mRNA/cDNA for GC01M226196 Gene

Expression for GC01M226196 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M226196 Gene

Orthologs for GC01M226196 Gene

No data available for Orthologs and Evolution for GC01M226196 Gene

Paralogs for GC01M226196 Gene

No data available for Paralogs for GC01M226196 Gene

Variants for GC01M226196 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M226196 Gene

Disorders for GC01M226196 Gene

No disorders were found for GC01M226196 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M226196 Gene

Publications for GC01M226196 Gene

  1. SRPDB: Signal Recognition Particle Database. (PMID: 12520023) Rosenblad MA … Samuelsson T (Nucleic acids research 2003) 1
  2. Towards the structure of the mammalian signal recognition particle. (PMID: 11839493) Wild K … Cusack S (Current opinion in structural biology 2002) 1
  3. Prediction of signal recognition particle RNA genes. (PMID: 12140321) Regalia M … Samuelsson T (Nucleic acids research 2002) 1
  4. Structural and energetic analysis of RNA recognition by a universally conserved protein from the signal recognition particle. (PMID: 11243816) Batey RT … Doudna JA (Journal of molecular biology 2001) 1
  5. Crystal structure of the ribonucleoprotein core of the signal recognition particle. (PMID: 10678824) Batey RT … Doudna JA (Science (New York, N.Y.) 2000) 1

No data available for External Links for GC01M226196 Gene

Products for GC01M226196 Gene

Sources for GC01M226196 Gene

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