Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC01M223645 Gene

Subcategory (RNA class) for GC01M223645 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01M223645 Gene

No Aliases found

ORGUL Members for GC01M223645 Gene

No data available for External Ids for GC01M223645 Gene

Summaries for GC01M223645 Gene

GeneCards Summary for GC01M223645 Gene

GC01M223645 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01M223645 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M223645 Gene

Genomics for GC01M223645 Gene

GeneHancer (GH) Regulatory Elements for GC01M223645 Gene

Promoters and enhancers for GC01M223645 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J223641 Enhancer 0.9 Ensembl ENCODE 0.7 +2.1 2124 1.1 SP1 GLIS2 RXRA RFX1 ZIC2 ZEB2 PATZ1 ZNF692 ZNF341 JUND CAPN8 GTF2IP20 GC01M223645 LOC105373034
GH01J223639 Enhancer 0.6 Ensembl 0.7 +4.8 4782 1.2 SP1 RXRA CEBPB RUNX3 YY1 CUX1 ZNF335 CEBPG HNF4A MAX CAPN8 GC01M223645 LOC105373034
GH01J223620 Enhancer 1.1 Ensembl ENCODE 0.3 +23.2 23179 3.2 ELF3 NKRF ZNF687 SP1 PPARG CREM ZNF644 EGR1 ZNF680 KAT8 CAPN8 CAPN2 ENSG00000229399 GC01M223645 LOC105373034
GH01J223628 Enhancer 0.8 Ensembl 0.4 +16.0 15982 0.4 HDGF CTCF GTF2F1 RAD21 RXRA IKZF1 ZNF143 REST LARP7 ZNF629 CAPN8 GC01M223645 LOC105373034
GH01J223629 Enhancer 0.6 Ensembl 0.4 +15.5 15482 0.2 ZNF473 CTCF ZNF776 ZNF311 NR2C2 ZFHX2 SALL2 ZNF621 ZNF521 BCL6B ENSG00000228106 CAPN8 NVL ENSG00000272750 DISP1 GTF2IP20 GC01M223645 LOC105373034
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M223645 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M223645 Gene

Genomic Locations for GC01M223645 Gene
chr1:223,644,110-223,644,383
(GRCh38/hg38)
Size:
274 bases
Orientation:
Minus strand

Genomic View for GC01M223645 Gene

Genes around GC01M223645 on UCSC Golden Path with GeneCards custom track

GC01M223645 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M223645 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M223645 Gene

Proteins for GC01M223645 Gene

Post-translational modifications for GC01M223645 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M223645 Gene

Domains & Families for GC01M223645 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M223645 Gene

Function for GC01M223645 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M223645 Gene

Localization for GC01M223645 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M223645 Gene

Pathways & Interactions for GC01M223645 Gene

PathCards logo

SuperPathways for GC01M223645 Gene

No Data Available

Interacting Proteins for GC01M223645 Gene

Gene Ontology (GO) - Biological Process for GC01M223645 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M223645 Gene

Drugs & Compounds for GC01M223645 Gene

No Compound Related Data Available

Transcripts for GC01M223645 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M223645 Gene

No ASD Table

Relevant External Links for GC01M223645 Gene

GeneLoc Exon Structure for
GC01M223645

No data available for mRNA/cDNA for GC01M223645 Gene

Expression for GC01M223645 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M223645 Gene

Orthologs for GC01M223645 Gene

No data available for Orthologs and Evolution for GC01M223645 Gene

Paralogs for GC01M223645 Gene

No data available for Paralogs for GC01M223645 Gene

Variants for GC01M223645 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M223645 Gene

Disorders for GC01M223645 Gene

No disorders were found for GC01M223645 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M223645 Gene

Publications for GC01M223645 Gene

No publications were found for GC01M223645 Gene.

No data available for External Links for GC01M223645 Gene

Products for GC01M223645 Gene

Sources for GC01M223645 Gene

Content
Loading form....