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Aliases for GC01M211207 Gene

Subcategory (RNA class) for GC01M211207 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for GC01M211207 Gene

No Aliases found

ORGUL Members for GC01M211207 Gene

No data available for External Ids for GC01M211207 Gene

Summaries for GC01M211207 Gene

GeneCards Summary for GC01M211207 Gene

GC01M211207 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC01M211207 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for GC01M211207 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M211207 Gene

Genomics for GC01M211207 Gene

GeneHancer (GH) Regulatory Elements for GC01M211207 Gene

Promoters and enhancers for GC01M211207 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J211207 Promoter 0.8 Ensembl 600.7 +0.3 333 0.4 MAFK ZNF316 MAFG TRIM28 ZNF507 ZBTB33 ENSG00000226986 GC01M211207 ENSG00000284376 LOC388734 RCOR3 SNX25P1 LINC00467
GH01J211222 Enhancer 1.1 Ensembl ENCODE 0.4 -15.2 -15155 1.3 CC2D1A CBFA2T2 MLLT1 GTF2F1 TRIM24 ZNF639 SMARCA4 MTA1 CAVIN1 GMEB1 RCOR3 RPL21P28 LINC00467 GC01M211207
GH01J211248 Enhancer 0.8 Ensembl ENCODE 0.3 -40.0 -39967 2.2 CBFA2T2 PRDM10 ZNF740 FOXK2 USF1 CEBPB NANOG ZNF197 ZNF354B LINC00467 RCOR3 ENSG00000226986 RPL21P28 GC01M211207
GH01J211231 Enhancer 0.3 Ensembl 0.3 -24.6 -24567 0.6 ZBTB33 ENSG00000226986 RCOR3 GC01M211207
GH01J211216 Enhancer 0.2 Ensembl 0.4 -9.0 -8967 0.2 LINC00467 GC01M211207 RCOR3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M211207 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M211207 Gene

Genomic Locations for GC01M211207 Gene
chr1:211,207,504-211,207,534
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand

Genomic View for GC01M211207 Gene

Genes around GC01M211207 on UCSC Golden Path with GeneCards custom track

GC01M211207 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M211207 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01M211207 Gene

ORGUL Member Location for GC01M211207 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M211207 Gene

Proteins for GC01M211207 Gene

Post-translational modifications for GC01M211207 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M211207 Gene

Domains & Families for GC01M211207 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M211207 Gene

Function for GC01M211207 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M211207 Gene

Localization for GC01M211207 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M211207 Gene

Pathways & Interactions for GC01M211207 Gene

PathCards logo

SuperPathways for GC01M211207 Gene

No Data Available

Interacting Proteins for GC01M211207 Gene

Gene Ontology (GO) - Biological Process for GC01M211207 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M211207 Gene

Drugs & Compounds for GC01M211207 Gene

No Compound Related Data Available

Transcripts for GC01M211207 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M211207 Gene

No ASD Table

Relevant External Links for GC01M211207 Gene

GeneLoc Exon Structure for
GC01M211207

No data available for mRNA/cDNA for GC01M211207 Gene

Expression for GC01M211207 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M211207 Gene

Orthologs for GC01M211207 Gene

No data available for Orthologs and Evolution for GC01M211207 Gene

Paralogs for GC01M211207 Gene

No data available for Paralogs for GC01M211207 Gene

Variants for GC01M211207 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M211207 Gene

Disorders for GC01M211207 Gene

No disorders were found for GC01M211207 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M211207 Gene

Publications for GC01M211207 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC01M211207 Gene

Products for GC01M211207 Gene

Sources for GC01M211207 Gene

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