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Aliases for GC01M206749 Gene

Subcategory (RNA class) for GC01M206749 Gene

Y RNA

Quality Score for this RNA gene is

15

Aliases for GC01M206749 Gene

No Aliases found

ORGUL Members for GC01M206749 Gene

No data available for External Ids for GC01M206749 Gene

Summaries for GC01M206749 Gene

GeneCards Summary for GC01M206749 Gene

GC01M206749 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC01M206749 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M206749 Gene

Genomics for GC01M206749 Gene

GeneHancer (GH) Regulatory Elements for GC01M206749 Gene

Promoters and enhancers for GC01M206749 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J206748 Enhancer 0.6 FANTOM5 Ensembl 600.7 -0.5 -509 2.8 RNF2 CTCF ENSG00000199349 GC01M206749 MAPKAPK2 IL19 IL10 IL20 RASSF5 IKBKE LOC105372877
GH01J206734 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.0 9991 7.4 SP1 CC2D1A CTCF ZKSCAN8 CBFA2T2 ZNF148 MLLT1 ZNF687 BACH1 TRIM24 MAPKAPK2 FCMR IL19 IL10 PIGR IL20 IL24 C1orf116 DYRK3 CD55
GH01J206744 Enhancer 1 FANTOM5 Ensembl 0.7 +3.8 3791 3.4 ZNF687 IKZF1 ZNF512 EED RUNX3 HDAC2 FOSL1 JUNB ZFHX2 BCOR MAPKAPK2 IL19 IL10 IL20 RASSF5 ENSG00000261000 DYRK3 IKBKE ENSG00000199349 GC01M206749
GH01J206722 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.3 +24.4 24404 2.2 SP1 MZF1 RXRA ZBTB8A ZIC2 SMARCC1 BRCA1 CEBPB CHD2 JUN MAPKAPK2 IL19 IL10 FCMR PIGR IL24 IL20 DYRK3 RASSF5 ENSG00000199349
GH01J206702 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.3 +42.6 42595 5.7 RELA CREM MLLT1 IKZF1 GLIS2 RXRA ZBTB8A ZNF600 PRDM10 IKZF2 MAPKAPK2 IL19 FCMR PIGR EIF2D FCAMR IL20 DYRK3 GC01P206699 PIR58159
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M206749 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M206749 Gene

Genomic Locations for GC01M206749 Gene
chr1:206,747,981-206,748,092
(GRCh38/hg38)
Size:
112 bases
Orientation:
Minus strand

Genomic View for GC01M206749 Gene

Genes around GC01M206749 on UCSC Golden Path with GeneCards custom track

GC01M206749 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M206749 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M206749 Gene

Proteins for GC01M206749 Gene

Post-translational modifications for GC01M206749 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M206749 Gene

Domains & Families for GC01M206749 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M206749 Gene

Function for GC01M206749 Gene

Phenotypes From GWAS Catalog for GC01M206749 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M206749 Gene

Localization for GC01M206749 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M206749 Gene

Pathways & Interactions for GC01M206749 Gene

PathCards logo

SuperPathways for GC01M206749 Gene

No Data Available

Interacting Proteins for GC01M206749 Gene

Gene Ontology (GO) - Biological Process for GC01M206749 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M206749 Gene

Drugs & Compounds for GC01M206749 Gene

No Compound Related Data Available

Transcripts for GC01M206749 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M206749 Gene

No ASD Table

Relevant External Links for GC01M206749 Gene

GeneLoc Exon Structure for
GC01M206749

No data available for mRNA/cDNA for GC01M206749 Gene

Expression for GC01M206749 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M206749 Gene

Orthologs for GC01M206749 Gene

No data available for Orthologs and Evolution for GC01M206749 Gene

Paralogs for GC01M206749 Gene

No data available for Paralogs for GC01M206749 Gene

Variants for GC01M206749 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M206749 Gene

Disorders for GC01M206749 Gene

No disorders were found for GC01M206749 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M206749 Gene

Publications for GC01M206749 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

No data available for External Links for GC01M206749 Gene

Products for GC01M206749 Gene

Sources for GC01M206749 Gene

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