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Aliases for GC01M202216 Gene

Subcategory (RNA class) for GC01M202216 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01M202216 Gene

No Aliases found

ORGUL Members for GC01M202216 Gene

No data available for External Ids for GC01M202216 Gene

Summaries for GC01M202216 Gene

GeneCards Summary for GC01M202216 Gene

GC01M202216 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01M202216 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M202216 Gene

Genomics for GC01M202216 Gene

GeneHancer (GH) Regulatory Elements for GC01M202216 Gene

Promoters and enhancers for GC01M202216 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J202233 Enhancer 1.2 ENCODE dbSUPER 600.7 +0.8 809 3.8 HDGF CTCF ZKSCAN8 CEBPG ZSCAN21 ZNF24 SP7 ZNF548 KLF14 PRDM1 GC01M202216 IPO9 IPO9-AS1 LGR6 KDM5B PTPRVP LOC101929388
GH01J202237 Enhancer 1 ENCODE dbSUPER 600.7 -1.2 -1237 0.3 HDGF ZSCAN21 PRDM1 GLIS2 ZBTB8A ZNF600 PRDM10 ZIC2 CTCF PATZ1 GC01M202216 LOC101929388 LGR6
GH01J202213 Promoter/Enhancer 1.5 EPDnew Ensembl dbSUPER 0.3 +21.6 21636 1.2 CTCF POLR2A ETS1 KLF1 LGR6 PTPRVP PTPN7 ARL8A GC01M202216
GH01J202203 Promoter/Enhancer 1.5 EPDnew ENCODE dbSUPER 0.3 +32.3 32299 0.2 CBFA2T2 TRIM24 SMARCA4 DPF2 IKZF1 ATF1 ZNF740 ZNF24 HDAC1 GATAD2B LGR6 CHI3L1 GC01M202216
GH01J202222 Enhancer 1 ENCODE dbSUPER 0.4 +13.5 13489 0.2 SP7 GLIS2 ZBTB8A ZIC2 ZEB2 ZNF639 ZNF629 PATZ1 ZNF692 TCF7L2 GC01M202216 LGR6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M202216 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M202216 Gene

Genomic Locations for GC01M202216 Gene
chr1:202,216,082-202,236,037
(GRCh38/hg38)
Size:
19,956 bases
Orientation:
Minus strand

Genomic View for GC01M202216 Gene

Genes around GC01M202216 on UCSC Golden Path with GeneCards custom track

GC01M202216 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M202216 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M202216 Gene

Proteins for GC01M202216 Gene

Post-translational modifications for GC01M202216 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M202216 Gene

Domains & Families for GC01M202216 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M202216 Gene

Function for GC01M202216 Gene

Phenotypes From GWAS Catalog for GC01M202216 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M202216 Gene

Localization for GC01M202216 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M202216 Gene

Pathways & Interactions for GC01M202216 Gene

PathCards logo

SuperPathways for GC01M202216 Gene

No Data Available

Interacting Proteins for GC01M202216 Gene

Gene Ontology (GO) - Biological Process for GC01M202216 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M202216 Gene

Drugs & Compounds for GC01M202216 Gene

No Compound Related Data Available

Transcripts for GC01M202216 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M202216 Gene

No ASD Table

Relevant External Links for GC01M202216 Gene

GeneLoc Exon Structure for
GC01M202216

No data available for mRNA/cDNA for GC01M202216 Gene

Expression for GC01M202216 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M202216 Gene

Orthologs for GC01M202216 Gene

No data available for Orthologs and Evolution for GC01M202216 Gene

Paralogs for GC01M202216 Gene

No data available for Paralogs for GC01M202216 Gene

Variants for GC01M202216 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M202216 Gene

Disorders for GC01M202216 Gene

No disorders were found for GC01M202216 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M202216 Gene

Publications for GC01M202216 Gene

No publications were found for GC01M202216 Gene.

No data available for External Links for GC01M202216 Gene

Products for GC01M202216 Gene

Sources for GC01M202216 Gene

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