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Aliases for GC01M200475 Gene

Subcategory (RNA class) for GC01M200475 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01M200475 Gene

No Aliases found

ORGUL Members for GC01M200475 Gene

No data available for External Ids for GC01M200475 Gene

Summaries for GC01M200475 Gene

GeneCards Summary for GC01M200475 Gene

GC01M200475 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01M200475 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M200475 Gene

Genomics for GC01M200475 Gene

GeneHancer (GH) Regulatory Elements for GC01M200475 Gene

Promoters and enhancers for GC01M200475 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J200474 Promoter 0.9 Ensembl 600.7 +0.5 530 0.2 RELA IKZF1 IKZF2 LARP7 EED BCLAF1 JUNB BATF STAT5A GC01M200475 GC01M200457 ZNF281 ENSG00000230623
GH01J200475 Promoter 0.8 Ensembl 600.7 +0.1 130 0.2 POLR2A LARP7 EED IKZF1 RCOR1 STAT5A GC01M200457 GC01M200475 ZNF281 ENSG00000230623
GH01J200473 Enhancer 0.4 Ensembl 600.7 +1.3 1330 0.2 MLLT1 CEBPB GC01M200475 GC01M200457 ZNF281 ENSG00000230623
GH01J200408 Promoter/Enhancer 2.5 UCNEbase EPDnew Ensembl ENCODE 0.2 +63.2 63155 5.4 SP1 ZFX CC2D1A ELF3 NKRF CEBPG POLR2A GTF2F1 ZNF384 ZNF687 PIR39640 ZNF281 ENSG00000230623 GC01M200475
GH01J200428 Enhancer 1 Ensembl ENCODE 0.3 +45.5 45531 2.6 MLLT1 CEBPG TRIM24 ZNF384 ZNF644 SMARCA4 DPF2 CEBPA GATAD2A RXRB ENSG00000230623 ZNF281 GC01M200475
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M200475 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M200475 Gene

Genomic Locations for GC01M200475 Gene
chr1:200,474,079-200,474,431
(GRCh38/hg38)
Size:
353 bases
Orientation:
Minus strand

Genomic View for GC01M200475 Gene

Genes around GC01M200475 on UCSC Golden Path with GeneCards custom track

GC01M200475 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M200475 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M200475 Gene

Proteins for GC01M200475 Gene

Post-translational modifications for GC01M200475 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M200475 Gene

Domains & Families for GC01M200475 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M200475 Gene

Function for GC01M200475 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M200475 Gene

Localization for GC01M200475 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M200475 Gene

Pathways & Interactions for GC01M200475 Gene

PathCards logo

SuperPathways for GC01M200475 Gene

No Data Available

Interacting Proteins for GC01M200475 Gene

Gene Ontology (GO) - Biological Process for GC01M200475 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M200475 Gene

Drugs & Compounds for GC01M200475 Gene

No Compound Related Data Available

Transcripts for GC01M200475 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M200475 Gene

No ASD Table

Relevant External Links for GC01M200475 Gene

GeneLoc Exon Structure for
GC01M200475

No data available for mRNA/cDNA for GC01M200475 Gene

Expression for GC01M200475 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M200475 Gene

Orthologs for GC01M200475 Gene

No data available for Orthologs and Evolution for GC01M200475 Gene

Paralogs for GC01M200475 Gene

No data available for Paralogs for GC01M200475 Gene

Variants for GC01M200475 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M200475 Gene

Disorders for GC01M200475 Gene

No disorders were found for GC01M200475 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M200475 Gene

Publications for GC01M200475 Gene

No publications were found for GC01M200475 Gene.

No data available for External Links for GC01M200475 Gene

Products for GC01M200475 Gene

Sources for GC01M200475 Gene

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