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Aliases for GC01M174687 Gene

Subcategory (RNA class) for GC01M174687 Gene


Quality Score for this RNA gene is


Aliases for GC01M174687 Gene

No Aliases found

ORGUL Members for GC01M174687 Gene

No data available for External Ids for GC01M174687 Gene

Summaries for GC01M174687 Gene

GeneCards Summary for GC01M174687 Gene

GC01M174687 is an RNA Gene, and is affiliated with the SECIS RNA class.

fRNAdb sequence ontologies for GC01M174687 Gene

  • SECIS_element: The incorporation of selenocysteine into a protein sequence is directed by an in-frame UGA codon (usually a stop codon) within the coding region of the mRNA. Selenoprotein mRNAs contain a conserved secondary structure in the 3' UTR that is required for the distinction of UGA stop from UGA selenocysteine. The selenocysteine insertion sequence (SECIS) is around 60 nt in length and adopts a hairpin structure which is sufficiently well-defined and conserved to act as a computational screen for selenoprotein genes.

Additional gene information for GC01M174687 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M174687 Gene

Genomics for GC01M174687 Gene

GeneHancer (GH) Regulatory Elements for GC01M174687 Gene

Promoters and enhancers for GC01M174687 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J174689 Enhancer 0.8 ENCODE 600.7 -1.9 -1895 1 ELF3 MAFK ZNF644 KAT8 SOX13 GATAD2A RXRB GABPA FOXA2 MAFG GC01M174687 RABGAP1L GC01M174688
GH01J174686 Enhancer 0.2 Ensembl 600.7 +1.6 1613 0.6 GC01M174687 RABGAP1L GC01M174448
GH01J174692 Enhancer 0.6 Ensembl 0.7 -5.0 -4987 1.4 MNT FOSL2 SOX13 FOXA2 SAP130 FOSL1 TEAD1 PRDM4 JUND HOMEZ RABGAP1L GC01M174687 GC01M174688
GH01J174713 Enhancer 0.5 ENCODE 0.3 -26.1 -26104 0.2 ELF3 GATAD2A TCF7 MAFK ETV5 GC01M174687 GC01M174688 RABGAP1L
GH01J174652 Enhancer 0.5 Ensembl 0.3 +34.5 34513 1.6 RFX1 ZFHX2 ZSCAN16 FOXA3 RABGAP1L SERPINC1 GAS5 DARS2 GC01M174687 GC01M174448
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M174687 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M174687 Gene

Genomic Locations for GC01M174687 Gene
71 bases
Minus strand

Genomic View for GC01M174687 Gene

Genes around GC01M174687 on UCSC Golden Path with GeneCards custom track

GC01M174687 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M174687 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M174687 Gene

Proteins for GC01M174687 Gene

Post-translational modifications for GC01M174687 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M174687 Gene

Domains & Families for GC01M174687 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M174687 Gene

Function for GC01M174687 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M174687 Gene

Localization for GC01M174687 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M174687 Gene

Pathways & Interactions for GC01M174687 Gene

PathCards logo

SuperPathways for GC01M174687 Gene

No Data Available

Interacting Proteins for GC01M174687 Gene

Gene Ontology (GO) - Biological Process for GC01M174687 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC01M174687 Gene

Drugs & Compounds for GC01M174687 Gene

No Compound Related Data Available

Transcripts for GC01M174687 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M174687 Gene

No ASD Table

Relevant External Links for GC01M174687 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC01M174687 Gene

Expression for GC01M174687 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M174687 Gene

Orthologs for GC01M174687 Gene

No data available for Orthologs and Evolution for GC01M174687 Gene

Paralogs for GC01M174687 Gene

No data available for Paralogs for GC01M174687 Gene

Variants for GC01M174687 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M174687 Gene

Disorders for GC01M174687 Gene

No disorders were found for GC01M174687 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M174687 Gene

Publications for GC01M174687 Gene

  1. A survey of metazoan selenocysteine insertion sequences. (PMID: 12458087) Lambert A … Gautheret D (Biochimie 2002) 1
  2. A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs. (PMID: 8634917) Walczak R … Krol A (RNA (New York, N.Y.) 1996) 1

No data available for External Links for GC01M174687 Gene

Products for GC01M174687 Gene

Sources for GC01M174687 Gene

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