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Aliases for GC01M149741 Gene

Subcategory (RNA class) for GC01M149741 Gene

tRNA

Quality Score for this RNA gene is

15

Aliases for GC01M149741 Gene

No Aliases found

ORGUL Members for GC01M149741 Gene

No data available for External Ids for GC01M149741 Gene

Summaries for GC01M149741 Gene

GeneCards Summary for GC01M149741 Gene

GC01M149741 is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for GC01M149741 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M149741 Gene

Genomics for GC01M149741 Gene

GeneHancer (GH) Regulatory Elements for GC01M149741 Gene

Promoters and enhancers for GC01M149741 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J149740 Enhancer 0.6 ENCODE 600.7 +0.0 35 0.2 SMARCA5 ATF3 ZNF217 GATAD2B SIN3A RCOR1 ZBTB40 ZBTB33 ETV6 GC01M149741 TRN-GTT8-1 ENSG00000234232 LOC102723955 LOC105371406
GH01J149741 Enhancer 0.3 ENCODE 600.7 -0.4 -445 0.2 ETV6 GC01M149741 TRN-GTT8-1 ENSG00000234232 LOC102723955
GH01J149746 Promoter/Enhancer 0.9 Ensembl ENCODE 0.4 -7.3 -7280 2 EZH2 ZBTB33 ENSG00000234232 LOC102723955 SV2A FCGR1A GC01M149741 TRN-GTT8-1
GH01J149735 Promoter 0.5 Ensembl 0.4 +5.0 5020 0.2 LOC105371406 GC01M149741 TRN-GTT8-1 LOC102723955 ENSG00000234232
GH01J149744 Enhancer 0.2 Ensembl 0.7 -4.7 -4680 0.8 ENSG00000234232 FCGR1A GC01M149741 LOC102723955 TRN-GTT8-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M149741 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M149741 Gene

Genomic Locations for GC01M149741 Gene
chr1:149,740,247-149,740,321
(GRCh38/hg38)
Size:
75 bases
Orientation:
Minus strand

Genomic View for GC01M149741 Gene

Genes around GC01M149741 on UCSC Golden Path with GeneCards custom track

GC01M149741 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M149741 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M149741 Gene

Proteins for GC01M149741 Gene

Post-translational modifications for GC01M149741 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M149741 Gene

Domains & Families for GC01M149741 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M149741 Gene

Function for GC01M149741 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M149741 Gene

Localization for GC01M149741 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M149741 Gene

Pathways & Interactions for GC01M149741 Gene

PathCards logo

SuperPathways for GC01M149741 Gene

No Data Available

Interacting Proteins for GC01M149741 Gene

Gene Ontology (GO) - Biological Process for GC01M149741 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M149741 Gene

Drugs & Compounds for GC01M149741 Gene

No Compound Related Data Available

Transcripts for GC01M149741 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M149741 Gene

No ASD Table

Relevant External Links for GC01M149741 Gene

GeneLoc Exon Structure for
GC01M149741

No data available for mRNA/cDNA for GC01M149741 Gene

Expression for GC01M149741 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M149741 Gene

Orthologs for GC01M149741 Gene

No data available for Orthologs and Evolution for GC01M149741 Gene

Paralogs for GC01M149741 Gene

No data available for Paralogs for GC01M149741 Gene

Variants for GC01M149741 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M149741 Gene

Disorders for GC01M149741 Gene

No disorders were found for GC01M149741 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M149741 Gene

Publications for GC01M149741 Gene

  1. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  2. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

No data available for External Links for GC01M149741 Gene

Products for GC01M149741 Gene

Sources for GC01M149741 Gene

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