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Aliases for GC01M147006 Gene

Subcategory (RNA class) for GC01M147006 Gene


Quality Score for this RNA gene is


Aliases for GC01M147006 Gene

No Aliases found

ORGUL Members for GC01M147006 Gene

No data available for External Ids for GC01M147006 Gene

Summaries for GC01M147006 Gene

GeneCards Summary for GC01M147006 Gene

GC01M147006 is an RNA Gene, and is affiliated with the tRNA class.

fRNAdb sequence ontologies for GC01M147006 Gene

  • tRNA: Transfer RNA (tRNA) molecules are approximately 80 nucleotides in length. Their secondary structure includes four short double-helical elements and three loops (D, anti-codon, and T loops). Further hydrogen bonds mediate the characteristic L-shaped molecular structure. tRNAs have two regions of fundamental functional importance: the anti-codon, which is responsible for specific mRNA codon recognition, and the 3' end, to which the tRNAs corresponding amino acid is attached (by aminoacyl-tRNA synthetases). tRNAs cope with the degeneracy of the genetic code in two manners: having more than one tRNA (with a specific anti-codon) for a particular amino acid; and 'wobble' base-pairing, i.e. permitting non-standard base-pairing at the 3rd anti-codon position.

View fRNAdb secondary structures for GC01M147006

Additional gene information for GC01M147006 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M147006 Gene

Genomics for GC01M147006 Gene

GeneHancer (GH) Regulatory Elements for GC01M147006 Gene

Promoters and enhancers for GC01M147006 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J147005 Enhancer 0.2 Ensembl 600.7 -0.4 -429 1.4 GC01M147006 LOC728989
GH01J147003 Enhancer 0.2 Ensembl 600.7 +1.6 1571 0.6 ENSG00000234225 GC01M147006
GH01J147030 Enhancer 0.8 Ensembl ENCODE 0.3 -25.0 -24964 1.3 NCOA3 CREB1 CTBP1 ZNF217 DPF2 CUX1 NFIB RCOR1 FOS SMARCE1 LOC644060 PFN1P8 LOC728989 GC01M147006
GH01J147037 Enhancer 0.2 Ensembl 0.3 -32.6 -32628 0.6 PFN1P8 LOC644060 LOC728989 GC01M147006
GH01J147032 Enhancer 0.2 Ensembl 0.3 -27.2 -27229 0.2 LOC644060 LOC728989 GC01M147006
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M147006 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M147006 Gene

Genomic Locations for GC01M147006 Gene
73 bases
Minus strand

Genomic View for GC01M147006 Gene

Genes around GC01M147006 on UCSC Golden Path with GeneCards custom track

GC01M147006 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M147006 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01M147006 Gene

ORGUL Member Location for GC01M147006 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M147006 Gene

Proteins for GC01M147006 Gene

Post-translational modifications for GC01M147006 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M147006 Gene

Domains & Families for GC01M147006 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M147006 Gene

Function for GC01M147006 Gene

Phenotypes From GWAS Catalog for GC01M147006 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M147006 Gene

Localization for GC01M147006 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M147006 Gene

Pathways & Interactions for GC01M147006 Gene

PathCards logo

SuperPathways for GC01M147006 Gene

No Data Available

Interacting Proteins for GC01M147006 Gene

Gene Ontology (GO) - Biological Process for GC01M147006 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC01M147006 Gene

Drugs & Compounds for GC01M147006 Gene

No Compound Related Data Available

Transcripts for GC01M147006 Gene

fRNAdb Secondary structures for GC01M147006 Gene

  • FR245914

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M147006 Gene

No ASD Table

Relevant External Links for GC01M147006 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC01M147006 Gene

Expression for GC01M147006 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M147006 Gene

Orthologs for GC01M147006 Gene

No data available for Orthologs and Evolution for GC01M147006 Gene

Paralogs for GC01M147006 Gene

No data available for Paralogs for GC01M147006 Gene

Variants for GC01M147006 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M147006 Gene

Disorders for GC01M147006 Gene

No disorders were found for GC01M147006 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M147006 Gene

Publications for GC01M147006 Gene

  1. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  2. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

No data available for External Links for GC01M147006 Gene

Products for GC01M147006 Gene

Sources for GC01M147006 Gene

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