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Aliases for GC01M111786 Gene

Subcategory (RNA class) for GC01M111786 Gene

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Quality Score for this RNA gene is

15

Aliases for GC01M111786 Gene

No Aliases found

ORGUL Members for GC01M111786 Gene

No data available for External Ids for GC01M111786 Gene

Summaries for GC01M111786 Gene

GeneCards Summary for GC01M111786 Gene

GC01M111786 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC01M111786 Gene

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

Additional gene information for GC01M111786 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M111786 Gene

Genomics for GC01M111786 Gene

GeneHancer (GH) Regulatory Elements for GC01M111786 Gene

Promoters and enhancers for GC01M111786 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J111785 Enhancer 0.2 Ensembl 600.7 +1.4 1410 1.4 GC01M111786 OVGP1 INKA2-AS1 INKA2 KCND3
GH01J111754 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.3 +31.1 31094 3.2 CC2D1A SP1 ELF3 ZFX ZNF148 NKRF POLR2A GTF2F1 CSDE1 ZNF384 DDX20 ENSG00000284830 LOC101928718 INKA2 ST7L DENND2D CAPZA1 INKA2-AS1 GC01M111786
GH01J111787 Enhancer 0.6 Ensembl 0.7 -2.2 -2190 3 PRDM10 CTCF ATF7 CEBPB ZNF10 POLR2A RFX5 RAD21 CEBPG ZMYM3 KCND3-AS1 OVGP1 INKA2-AS1 DDX20 GC01M111786 KCND3-IT1 KCND3
GH01J111769 Enhancer 0.9 Ensembl ENCODE 0.4 +17.4 17410 0.6 CC2D1A CTCF CEBPG RAD21 RXRA ARID2 CEBPA REST TRIM22 FOXA2 DDX20 INKA2-AS1 INKA2 GC01M111786
GH01J111777 Enhancer 0.7 Ensembl ENCODE 0.4 +8.6 8610 2.2 IKZF1 SIN3A TEAD3 LCORL DDX20 INKA2 INKA2-AS1 GC01M111786 KCND3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M111786 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M111786 Gene

Genomic Locations for GC01M111786 Gene
chr1:111,786,997-111,787,111
(GRCh38/hg38)
Size:
115 bases
Orientation:
Minus strand

Genomic View for GC01M111786 Gene

Genes around GC01M111786 on UCSC Golden Path with GeneCards custom track

GC01M111786 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M111786 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M111786 Gene

Proteins for GC01M111786 Gene

Post-translational modifications for GC01M111786 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M111786 Gene

Domains & Families for GC01M111786 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M111786 Gene

Function for GC01M111786 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M111786 Gene

Localization for GC01M111786 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M111786 Gene

Pathways & Interactions for GC01M111786 Gene

PathCards logo

SuperPathways for GC01M111786 Gene

No Data Available

Interacting Proteins for GC01M111786 Gene

Gene Ontology (GO) - Biological Process for GC01M111786 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M111786 Gene

Drugs & Compounds for GC01M111786 Gene

No Compound Related Data Available

Transcripts for GC01M111786 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M111786 Gene

No ASD Table

Relevant External Links for GC01M111786 Gene

GeneLoc Exon Structure for
GC01M111786

No data available for mRNA/cDNA for GC01M111786 Gene

Expression for GC01M111786 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M111786 Gene

Orthologs for GC01M111786 Gene

No data available for Orthologs and Evolution for GC01M111786 Gene

Paralogs for GC01M111786 Gene

No data available for Paralogs for GC01M111786 Gene

Variants for GC01M111786 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M111786 Gene

Disorders for GC01M111786 Gene

No disorders were found for GC01M111786 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M111786 Gene

Publications for GC01M111786 Gene

  1. Control of human potassium channel inactivation by editing of a small mRNA hairpin. (PMID: 15361858) Bhalla T … Reenan R (Nature structural & molecular biology 2004) 1

No data available for External Links for GC01M111786 Gene

Products for GC01M111786 Gene

Sources for GC01M111786 Gene

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