Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC01M108841 Gene

Subcategory (RNA class) for GC01M108841 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01M108841 Gene

No Aliases found

ORGUL Members for GC01M108841 Gene

No data available for External Ids for GC01M108841 Gene

Summaries for GC01M108841 Gene

GeneCards Summary for GC01M108841 Gene

GC01M108841 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01M108841 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M108841 Gene

Genomics for GC01M108841 Gene

GeneHancer (GH) Regulatory Elements for GC01M108841 Gene

Promoters and enhancers for GC01M108841 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J108961 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.2 +56.7 56733 2.7 SP1 CC2D1A ZFX ELF3 MNT NKRF POLR2A ZNF121 CEBPG RERE CLCC1 ENSG00000274068 PRPF38B C1orf194 WDR47 TAF13 GC01P108959 GC01M108841
GH01J108956 Promoter/Enhancer 1.1 Ensembl ENCODE 0.2 +62.9 62888 0.8 IKZF1 RFX1 HDGF NFIC DPF2 VEZF1 ZBTB33 KLF1 ENSG00000270066 GC01P108959 CLCC1 ENSG00000274068 GC01M108841 GPSM2
GH01J108875 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.1 +142.2 142150 4.2 ZFX CC2D1A MNT CBFA2T2 NKRF POLR2A MLLT1 ZNF121 GTF2F1 ZSCAN21 GPSM2 PRPF38B PSRC1 ENSG00000244716 ENSG00000228665 SPATA42 CLCC1 GC01P108959 ENSG00000274068 GC01M108841
GH01J109026 Enhancer 0.5 Ensembl 0.4 -6.2 -6227 0.2 PKNOX1 ZBTB33 PRDM6 CBFA2T3 RPS27P6 GC01M108841 WDR47
GH01J108947 Promoter/Enhancer 1 EPDnew ENCODE 0.2 +71.4 71392 1.6 ZNF341 ZFHX2 NANOG POU5F1 EGR2 CLCC1 TMEM167B ENSG00000270066 GC01P108959 ENSG00000274068 GPSM2 GC01M108841
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M108841 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M108841 Gene

Genomic Locations for GC01M108841 Gene
chr1:108,841,758-109,019,874
(GRCh38/hg38)
Size:
178,117 bases
Orientation:
Minus strand

Genomic View for GC01M108841 Gene

Genes around GC01M108841 on UCSC Golden Path with GeneCards custom track

GC01M108841 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M108841 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M108841 Gene

Proteins for GC01M108841 Gene

Post-translational modifications for GC01M108841 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M108841 Gene

Domains & Families for GC01M108841 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M108841 Gene

Function for GC01M108841 Gene

Phenotypes From GWAS Catalog for GC01M108841 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M108841 Gene

Localization for GC01M108841 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M108841 Gene

Pathways & Interactions for GC01M108841 Gene

PathCards logo

SuperPathways for GC01M108841 Gene

No Data Available

Interacting Proteins for GC01M108841 Gene

Gene Ontology (GO) - Biological Process for GC01M108841 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M108841 Gene

Drugs & Compounds for GC01M108841 Gene

No Compound Related Data Available

Transcripts for GC01M108841 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M108841 Gene

No ASD Table

Relevant External Links for GC01M108841 Gene

GeneLoc Exon Structure for
GC01M108841

No data available for mRNA/cDNA for GC01M108841 Gene

Expression for GC01M108841 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M108841 Gene

Orthologs for GC01M108841 Gene

No data available for Orthologs and Evolution for GC01M108841 Gene

Paralogs for GC01M108841 Gene

No data available for Paralogs for GC01M108841 Gene

Variants for GC01M108841 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M108841 Gene

Disorders for GC01M108841 Gene

No disorders were found for GC01M108841 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M108841 Gene

Publications for GC01M108841 Gene

No publications were found for GC01M108841 Gene.

No data available for External Links for GC01M108841 Gene

Products for GC01M108841 Gene

Sources for GC01M108841 Gene

Content
Loading form....