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Aliases for GC01M108671 Gene

Subcategory (RNA class) for GC01M108671 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01M108671 Gene

No Aliases found

ORGUL Members for GC01M108671 Gene

No data available for External Ids for GC01M108671 Gene

Summaries for GC01M108671 Gene

GeneCards Summary for GC01M108671 Gene

GC01M108671 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01M108671 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M108671 Gene

Genomics for GC01M108671 Gene

GeneHancer (GH) Regulatory Elements for GC01M108671 Gene

Promoters and enhancers for GC01M108671 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J108703 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 600.7 -1.5 -1514 2.3 CC2D1A MLLT1 MCM2 MAFK SMARCA4 IKZF1 ZNF600 IKZF2 ZIC2 LARP7 GC01M108671 ENSG00000232971 HENMT1 PRPF38B FAM102B TMEM167B FNDC7
GH01J108691 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 +8.9 8924 5.8 CC2D1A ELF3 ZFX ZKSCAN8 ZNF148 NKRF POLR2A MLLT1 ZNF121 GTF2F1 GC01M108690 PRPF38B ENSG00000232971 GC01P108697 GC01M108671
GH01J108698 Enhancer 0.7 dbSUPER 0.7 +2.8 2809 3.3 MLLT1 PRDM1 ZNF512 ZNF24 MTA2 NKRF ZNF184 TSC22D4 POLR2A HDGF GC01P108697 ENSG00000244716 PSRC1 PRPF38B ENSG00000232971 HENMT1 ENSG00000228665 SLC25A24 GC01M108671
GH01J108697 Enhancer 0.7 UCNEbase dbSUPER 0.7 +4.7 4697 0.3 POLR2A GC01P108697 ENSG00000232971 GC01M108671 GC01M108690 PRPF38B
GH01J108708 Enhancer 0.6 Ensembl 0.4 -6.5 -6479 0.6 CTCF PKNOX1 REST ZNF341 CTBP1 ZBTB11 RAD21 ATF2 FNDC7 GC01M108671
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M108671 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M108671 Gene

Genomic Locations for GC01M108671 Gene
chr1:108,671,172-108,702,642
(GRCh38/hg38)
Size:
31,471 bases
Orientation:
Minus strand

Genomic View for GC01M108671 Gene

Genes around GC01M108671 on UCSC Golden Path with GeneCards custom track

GC01M108671 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M108671 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M108671 Gene

Proteins for GC01M108671 Gene

Post-translational modifications for GC01M108671 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M108671 Gene

Domains & Families for GC01M108671 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M108671 Gene

Function for GC01M108671 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M108671 Gene

Localization for GC01M108671 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M108671 Gene

Pathways & Interactions for GC01M108671 Gene

PathCards logo

SuperPathways for GC01M108671 Gene

No Data Available

Interacting Proteins for GC01M108671 Gene

Gene Ontology (GO) - Biological Process for GC01M108671 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M108671 Gene

Drugs & Compounds for GC01M108671 Gene

No Compound Related Data Available

Transcripts for GC01M108671 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M108671 Gene

No ASD Table

Relevant External Links for GC01M108671 Gene

GeneLoc Exon Structure for
GC01M108671

No data available for mRNA/cDNA for GC01M108671 Gene

Expression for GC01M108671 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M108671 Gene

Orthologs for GC01M108671 Gene

No data available for Orthologs and Evolution for GC01M108671 Gene

Paralogs for GC01M108671 Gene

No data available for Paralogs for GC01M108671 Gene

Variants for GC01M108671 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M108671 Gene

Disorders for GC01M108671 Gene

No disorders were found for GC01M108671 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M108671 Gene

Publications for GC01M108671 Gene

No publications were found for GC01M108671 Gene.

No data available for External Links for GC01M108671 Gene

Products for GC01M108671 Gene

Sources for GC01M108671 Gene

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