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Aliases for GC01M092701 Gene

Subcategory (RNA class) for GC01M092701 Gene


Quality Score for this RNA gene is


Aliases for GC01M092701 Gene

No Aliases found

ORGUL Members for GC01M092701 Gene

No data available for External Ids for GC01M092701 Gene

Summaries for GC01M092701 Gene

GeneCards Summary for GC01M092701 Gene

GC01M092701 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC01M092701 Gene

  • U4_snRNA: U4 small nuclear RNA (U4 snRNA) is a component of the major U2-dependent spliceosome. It forms a duplex with U6, and with each splicing round, it is displaced from U6 (and the spliceosome) in an ATP-dependent manner, allowing U6 to refold and create the active site for splicing catalysis. A recycling process involving protein Prp24 re-anneals U4 and U6.

Additional gene information for GC01M092701 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M092701 Gene

Genomics for GC01M092701 Gene

GeneHancer (GH) Regulatory Elements for GC01M092701 Gene

Promoters and enhancers for GC01M092701 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J092708 Enhancer 1 Ensembl ENCODE 0.4 -7.7 -7667 0.8 CC2D1A MLLT1 BACH1 MCM2 MAFK TRIM24 SMARCA4 GMEB1 DPF2 IKZF1 DR1 DIPK1A EVI5 GC01M092701 RNU4-59P ENSG00000225505
GH01J092709 Enhancer 0.9 Ensembl ENCODE 0.4 -10.1 -10108 3.3 ZNF148 ZNF384 KAT8 PKNOX1 ZNF740 TCF7L2 ZNF501 ZSCAN5C EHMT2 SAP130 EVI5 GC01M092701 RNU4-59P ENSG00000225505
GH01J092705 Enhancer 0.5 Ensembl 0.7 -4.6 -4566 1 JUN IKZF1 PRDM6 DACH1 EVI5 DIPK1A GC01M092701 RNU4-59P ENSG00000225505
GH01J092691 Enhancer 0.5 Ensembl 0.4 +8.8 8833 1 SOX6 JUNB BATF FEZF1 DIPK1A GC01M092701 RNU4-59P HMGB3P9 EVI5
GH01J092682 Enhancer 0.5 Ensembl 0.4 +18.6 18633 0.6 PKNOX1 SOX6 ZNF507 BHLHE40 CBFA2T3 GC01M092701 RNU4-59P HMGB3P9 EVI5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M092701 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M092701 Gene

Genomic Locations for GC01M092701 Gene
117 bases
Minus strand

Genomic View for GC01M092701 Gene

Genes around GC01M092701 on UCSC Golden Path with GeneCards custom track

GC01M092701 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M092701 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M092701 Gene

Proteins for GC01M092701 Gene

Post-translational modifications for GC01M092701 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M092701 Gene

Domains & Families for GC01M092701 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M092701 Gene

Function for GC01M092701 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M092701 Gene

Localization for GC01M092701 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M092701 Gene

Pathways & Interactions for GC01M092701 Gene

PathCards logo

SuperPathways for GC01M092701 Gene

No Data Available

Interacting Proteins for GC01M092701 Gene

Gene Ontology (GO) - Biological Process for GC01M092701 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC01M092701 Gene

Drugs & Compounds for GC01M092701 Gene

No Compound Related Data Available

Transcripts for GC01M092701 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M092701 Gene

No ASD Table

Relevant External Links for GC01M092701 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC01M092701 Gene

Expression for GC01M092701 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M092701 Gene

Orthologs for GC01M092701 Gene

No data available for Orthologs and Evolution for GC01M092701 Gene

Paralogs for GC01M092701 Gene

No data available for Paralogs for GC01M092701 Gene

Variants for GC01M092701 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M092701 Gene

Disorders for GC01M092701 Gene

No disorders were found for GC01M092701 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M092701 Gene

Publications for GC01M092701 Gene

  1. Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment. (PMID: 11163207) Vidovic I … Ficner R (Molecular cell 2000) 1
  2. A spliceosomal recycling factor that reanneals U4 and U6 small nuclear ribonucleoprotein particles. (PMID: 9452384) Raghunathan PL … Guthrie C (Science (New York, N.Y.) 1998) 1
  3. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  4. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

No data available for External Links for GC01M092701 Gene

Products for GC01M092701 Gene

Sources for GC01M092701 Gene

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