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Aliases for GC01M084333 Gene

Subcategory (RNA class) for GC01M084333 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01M084333 Gene

No Aliases found

ORGUL Members for GC01M084333 Gene

No data available for External Ids for GC01M084333 Gene

Summaries for GC01M084333 Gene

GeneCards Summary for GC01M084333 Gene

GC01M084333 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01M084333 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M084333 Gene

Genomics for GC01M084333 Gene

GeneHancer (GH) Regulatory Elements for GC01M084333 Gene

Promoters and enhancers for GC01M084333 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J084432 Enhancer 0.7 ENCODE 600.7 -0.6 -616 3 CC2D1A CTCF ZNF384 MAFK PRDM1 RAD21 RFX1 REST POLR2A TRIM22 GC01M084333 DNASE2B GNG5 SPATA1 UOX SAMD13 RPF1 ENSG00000199959 ENSG00000285361
GH01J084405 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 0.3 +25.6 25565 5.7 NFIB SP1 IKZF1 POLR2A FOXA2 MNT NFE2 JUND MAFG YY1 DNASE2B SAMD13 ENSG00000199959 GC01M084333
GH01J084425 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 +7.3 7309 4.1 ZNF316 CEBPB JUN EGR1 NFE2 JUND EP300 MAFG STAT3 TCF7L2 DNASE2B UOX ENSG00000199959 SPATA1 CTBS SAMD13 PRKACB GC01M084333
GH01J084442 Enhancer 1 Ensembl ENCODE 0.4 -9.4 -9361 2.2 CTCF MLLT1 RAD21 FOSL2 ARID2 REST PKNOX1 TRIM22 CBFB JUN RPF1 DNASE2B GC01M084333 ENSG00000285361
GH01J084386 Enhancer 0.9 Ensembl dbSUPER 0.3 +44.6 44639 3.8 RELA CREM IKZF1 RFX1 BACH1 IKZF2 REST CTCF DPF2 BMI1 ENSG00000199959 UOX GC01M084160 GC01M084333 SAMD13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M084333 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M084333 Gene

Genomic Locations for GC01M084333 Gene
chr1:84,333,545-84,433,740
(GRCh38/hg38)
Size:
100,196 bases
Orientation:
Minus strand

Genomic View for GC01M084333 Gene

Genes around GC01M084333 on UCSC Golden Path with GeneCards custom track

GC01M084333 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M084333 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M084333 Gene

Proteins for GC01M084333 Gene

Post-translational modifications for GC01M084333 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M084333 Gene

Domains & Families for GC01M084333 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M084333 Gene

Function for GC01M084333 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M084333 Gene

Localization for GC01M084333 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M084333 Gene

Pathways & Interactions for GC01M084333 Gene

PathCards logo

SuperPathways for GC01M084333 Gene

No Data Available

Interacting Proteins for GC01M084333 Gene

Gene Ontology (GO) - Biological Process for GC01M084333 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M084333 Gene

Drugs & Compounds for GC01M084333 Gene

No Compound Related Data Available

Transcripts for GC01M084333 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M084333 Gene

No ASD Table

Relevant External Links for GC01M084333 Gene

GeneLoc Exon Structure for
GC01M084333

No data available for mRNA/cDNA for GC01M084333 Gene

Expression for GC01M084333 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M084333 Gene

Orthologs for GC01M084333 Gene

No data available for Orthologs and Evolution for GC01M084333 Gene

Paralogs for GC01M084333 Gene

No data available for Paralogs for GC01M084333 Gene

Variants for GC01M084333 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M084333 Gene

Disorders for GC01M084333 Gene

No disorders were found for GC01M084333 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M084333 Gene

Publications for GC01M084333 Gene

No publications were found for GC01M084333 Gene.

No data available for External Links for GC01M084333 Gene

Products for GC01M084333 Gene

Sources for GC01M084333 Gene

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