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Aliases for GC01M070853 Gene

Subcategory (RNA class) for GC01M070853 Gene

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Quality Score for this RNA gene is

19

Aliases for GC01M070853 Gene

No Aliases found

ORGUL Members for GC01M070853 Gene

No data available for External Ids for GC01M070853 Gene

Summaries for GC01M070853 Gene

GeneCards Summary for GC01M070853 Gene

GC01M070853 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC01M070853 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC01M070853

Additional gene information for GC01M070853 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M070853 Gene

Genomics for GC01M070853 Gene

GeneHancer (GH) Regulatory Elements for GC01M070853 Gene

Promoters and enhancers for GC01M070853 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J070854 Enhancer 0.2 Ensembl 600.7 -1.8 -1842 0.2 GC01M070853 GC01M070854 LOC102724572 ENSG00000235782 PTGER3
GH01J070855 Enhancer 0.4 Ensembl 0.7 -2.4 -2442 0.2 CEBPG CEBPB GC01M070853 GC01M070854 LOC102724572 ENSG00000235782 PTGER3
GH01J070864 Enhancer 0.6 Ensembl 0.4 -11.6 -11612 0.5 MAFK NFE2L2 ZNF24 RFX1 ZNF316 NFE2 MAFG IKZF1 EMSY GC01M070853 GC01M070854 ENSG00000235782 PTGER3
GH01J070874 Enhancer 0.7 Ensembl ENCODE 0.3 -21.6 -21620 1.8 RFX1 DPF2 GATA3 FOXA1 JUND GC01M070853 GC01M070854 ENSG00000235782 PTGER3
GH01J070909 Enhancer 0.9 Ensembl ENCODE 0.2 -56.1 -56142 4.4 SMARCA4 PKNOX1 ZNF740 EP300 MGA RUNX3 DPF2 CEBPG CEBPB TAL1 ENSG00000235782 HHLA3 PTGER3 GC01M070853 GC01M070854
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M070853 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M070853 Gene

Genomic Locations for GC01M070853 Gene
chr1:70,852,774-70,852,859
(GRCh38/hg38)
Size:
86 bases
Orientation:
Minus strand

Genomic View for GC01M070853 Gene

Genes around GC01M070853 on UCSC Golden Path with GeneCards custom track

GC01M070853 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M070853 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01M070853 Gene

ORGUL Member Location for GC01M070853 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M070853 Gene

Proteins for GC01M070853 Gene

Post-translational modifications for GC01M070853 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M070853 Gene

Domains & Families for GC01M070853 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M070853 Gene

Function for GC01M070853 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M070853 Gene

Localization for GC01M070853 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M070853 Gene

Pathways & Interactions for GC01M070853 Gene

PathCards logo

SuperPathways for GC01M070853 Gene

No Data Available

Interacting Proteins for GC01M070853 Gene

Gene Ontology (GO) - Biological Process for GC01M070853 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M070853 Gene

Drugs & Compounds for GC01M070853 Gene

No Compound Related Data Available

Transcripts for GC01M070853 Gene

fRNAdb Secondary structures for GC01M070853 Gene

  • FR222490

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M070853 Gene

No ASD Table

Relevant External Links for GC01M070853 Gene

GeneLoc Exon Structure for
GC01M070853

No data available for mRNA/cDNA for GC01M070853 Gene

Expression for GC01M070853 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M070853 Gene

Orthologs for GC01M070853 Gene

No data available for Orthologs and Evolution for GC01M070853 Gene

Paralogs for GC01M070853 Gene

No data available for Paralogs for GC01M070853 Gene

Variants for GC01M070853 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M070853 Gene

Disorders for GC01M070853 Gene

No disorders were found for GC01M070853 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M070853 Gene

Publications for GC01M070853 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

No data available for External Links for GC01M070853 Gene

Products for GC01M070853 Gene

Sources for GC01M070853 Gene

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