Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC01M067268 Gene

Subcategory (RNA class) for GC01M067268 Gene

snRNA

Quality Score for this RNA gene is

15

Aliases for GC01M067268 Gene

No Aliases found

ORGUL Members for GC01M067268 Gene

No data available for External Ids for GC01M067268 Gene

Summaries for GC01M067268 Gene

GeneCards Summary for GC01M067268 Gene

GC01M067268 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC01M067268 Gene

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

Additional gene information for GC01M067268 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M067268 Gene

Genomics for GC01M067268 Gene

GeneHancer (GH) Regulatory Elements for GC01M067268 Gene

Promoters and enhancers for GC01M067268 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J067274 Enhancer 0.7 ENCODE 0.4 -7.0 -7006 0.2 CREM IKZF1 IKZF2 TRIM22 DPF2 RUNX3 BCL11A BMI1 JUNB IRF4 IL12RB2 LOC100130497 GC01M067268
GH01J067275 Enhancer 0.6 Ensembl 0.4 -7.4 -7374 0.2 CREM IKZF1 IKZF2 TRIM22 DPF2 BMI1 ATF2 ATF7 NFATC1 TARDBP IL12RB2 LOC100130497 GC01M067268
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M067268 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M067268 Gene

Genomic Locations for GC01M067268 Gene
chr1:67,267,600-67,267,727
(GRCh38/hg38)
Size:
128 bases
Orientation:
Minus strand

Genomic View for GC01M067268 Gene

Genes around GC01M067268 on UCSC Golden Path with GeneCards custom track

GC01M067268 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M067268 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M067268 Gene

Proteins for GC01M067268 Gene

Post-translational modifications for GC01M067268 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M067268 Gene

Domains & Families for GC01M067268 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M067268 Gene

Function for GC01M067268 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M067268 Gene

Localization for GC01M067268 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M067268 Gene

Pathways & Interactions for GC01M067268 Gene

PathCards logo

SuperPathways for GC01M067268 Gene

No Data Available

Interacting Proteins for GC01M067268 Gene

Gene Ontology (GO) - Biological Process for GC01M067268 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M067268 Gene

Drugs & Compounds for GC01M067268 Gene

No Compound Related Data Available

Transcripts for GC01M067268 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M067268 Gene

No ASD Table

Relevant External Links for GC01M067268 Gene

GeneLoc Exon Structure for
GC01M067268

No data available for mRNA/cDNA for GC01M067268 Gene

Expression for GC01M067268 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M067268 Gene

Orthologs for GC01M067268 Gene

No data available for Orthologs and Evolution for GC01M067268 Gene

Paralogs for GC01M067268 Gene

No data available for Paralogs for GC01M067268 Gene

Variants for GC01M067268 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M067268 Gene

Disorders for GC01M067268 Gene

No disorders were found for GC01M067268 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M067268 Gene

Publications for GC01M067268 Gene

  1. Evolutionary conservation of minor U12-type spliceosome between plants and humans. (PMID: 15987817) Lorkovic ZJ … Barta A (RNA (New York, N.Y.) 2005) 1
  2. A revised model for U4atac/U6atac snRNA base pairing. (PMID: 11911359) Padgett RA … Shukla GC (RNA (New York, N.Y.) 2002) 1
  3. Domains of human U4atac snRNA required for U12-dependent splicing in vivo. (PMID: 12409455) Shukla GC … Padgett RA (Nucleic acids research 2002) 1

No data available for External Links for GC01M067268 Gene

Products for GC01M067268 Gene

Sources for GC01M067268 Gene

Content
Loading form....