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Aliases for GC01M055377 Gene

Subcategory (RNA class) for GC01M055377 Gene

7SK RNA

Quality Score for this RNA gene is

15

Aliases for GC01M055377 Gene

No Aliases found

ORGUL Members for GC01M055377 Gene

No data available for External Ids for GC01M055377 Gene

Summaries for GC01M055377 Gene

GeneCards Summary for GC01M055377 Gene

GC01M055377 is an RNA Gene, and is affiliated with the 7SK RNA class.

fRNAdb sequence ontologies for GC01M055377 Gene

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

Additional gene information for GC01M055377 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M055377 Gene

Genomics for GC01M055377 Gene

GeneHancer (GH) Regulatory Elements for GC01M055377 Gene

Promoters and enhancers for GC01M055377 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J055374 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +1.6 1596 1.9 CTCF RAD21 ZNF143 REST TRIM22 ZNF501 SMC3 ZNF654 HIC1 RB1 GC01M055377 RN7SKP291 MTCO2P34 RNU6-830P ENSG00000234810
GH01J055378 Enhancer 0.9 ENCODE dbSUPER 0.7 -2.8 -2808 2.4 CTCF ZNF644 RAD21 GATAD2A REST NFKBIZ ZSCAN5C TGIF2 ZBTB25 ZKSCAN1 GC01M055377 RN7SKP291 GC01P055399 ENSG00000234810
GH01J055383 Enhancer 0.4 Ensembl 0.4 -6.4 -6449 0.2 ZSCAN4 MNT GC01M055377 RN7SKP291 GC01P055399 ENSG00000234810
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M055377 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M055377 Gene

Genomic Locations for GC01M055377 Gene
chr1:55,376,525-55,376,852
(GRCh38/hg38)
Size:
328 bases
Orientation:
Minus strand

Genomic View for GC01M055377 Gene

Genes around GC01M055377 on UCSC Golden Path with GeneCards custom track

GC01M055377 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M055377 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M055377 Gene

Proteins for GC01M055377 Gene

Post-translational modifications for GC01M055377 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M055377 Gene

Domains & Families for GC01M055377 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M055377 Gene

Function for GC01M055377 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M055377 Gene

Localization for GC01M055377 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M055377 Gene

Pathways & Interactions for GC01M055377 Gene

PathCards logo

SuperPathways for GC01M055377 Gene

No Data Available

Interacting Proteins for GC01M055377 Gene

Gene Ontology (GO) - Biological Process for GC01M055377 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M055377 Gene

Drugs & Compounds for GC01M055377 Gene

No Compound Related Data Available

Transcripts for GC01M055377 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M055377 Gene

No ASD Table

Relevant External Links for GC01M055377 Gene

GeneLoc Exon Structure for
GC01M055377

No data available for mRNA/cDNA for GC01M055377 Gene

Expression for GC01M055377 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M055377 Gene

Orthologs for GC01M055377 Gene

No data available for Orthologs and Evolution for GC01M055377 Gene

Paralogs for GC01M055377 Gene

No data available for Paralogs for GC01M055377 Gene

Variants for GC01M055377 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M055377 Gene

Disorders for GC01M055377 Gene

No disorders were found for GC01M055377 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M055377 Gene

Publications for GC01M055377 Gene

  1. Transcription: surprising role for an elusive small nuclear RNA. (PMID: 11864590) Blencowe BJ (Current biology : CB 2002) 1
  2. Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function. (PMID: 1646389) Wassarman DA … Steitz JA (Molecular and cellular biology 1991) 1

No data available for External Links for GC01M055377 Gene

Products for GC01M055377 Gene

Sources for GC01M055377 Gene

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