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Aliases for GC01M052352 Gene

Subcategory (RNA class) for GC01M052352 Gene

lncRNA

Quality Score for this RNA gene is

19

Aliases for GC01M052352 Gene

No Aliases found

No data available for External Ids for GC01M052352 Gene

Summaries for GC01M052352 Gene

GeneCards Summary for GC01M052352 Gene

GC01M052352 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC01M052352 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC01M052352

Additional gene information for GC01M052352 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M052352 Gene

Genomics for GC01M052352 Gene

GeneHancer (GH) Regulatory Elements for GC01M052352 Gene

Promoters and enhancers for GC01M052352 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J052350 Enhancer 0.7 Ensembl ENCODE 600.7 +1.7 1700 1.8 POLR2A FOXA2 SUPT5H FOS HLF ZNF362 GC01M052353 GC01M052352 CC2D1B PRPF38A GC01P052280
GH01J052348 Enhancer 0.8 Ensembl ENCODE 0.7 +3.8 3805 0.9 IKZF1 REST SCRT2 POLR2A SCRT1 RCOR1 CTCF SUPT5H RAD21 ZNF654 GC01M052353 GC01M052352 CC2D1B GC01P052280
GH01J052330 Enhancer 1.1 FANTOM5 Ensembl 0.3 +22.4 22416 0.8 GTF2F1 CTCF CDC5L BACH1 NCOA6 TRIM24 EGR1 MTA1 DPF2 IKZF1 CC2D1B PLA2G12AP1 TXNDC12-AS1 GC01M052352 GC01M052353 GC01P052280 ZFYVE9
GH01J052328 Enhancer 0.8 Ensembl ENCODE 0.3 +23.9 23916 0.6 MAFK SMARCA4 PKNOX1 ZNF316 NFE2 FOXA2 MAFG SAP130 DPF2 FOS CC2D1B PLA2G12AP1 TXNDC12-AS1 GC01M052353 GC01M052352 GC01P052280 ZFYVE9
GH01J052296 Enhancer 0.9 Ensembl ENCODE 0.2 +56.3 56317 0.6 CC2D1A CTCF RAD21 PRDM10 GATAD2A REST TRIM22 SOX6 ZNF10 RUNX3 GC01P052280 GC01M052353 GC01M052352 ZFYVE9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M052352 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M052352 Gene

Genomic Locations for GC01M052352 Gene
chr1:52,352,535-52,352,817
(GRCh38/hg38)
Size:
283 bases
Orientation:
Minus strand

Genomic View for GC01M052352 Gene

Genes around GC01M052352 on UCSC Golden Path with GeneCards custom track

GC01M052352 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M052352 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01M052352 Gene

ORGUL Member Location for GC01M052352 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M052352 Gene

Proteins for GC01M052352 Gene

Post-translational modifications for GC01M052352 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M052352 Gene

Domains & Families for GC01M052352 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M052352 Gene

Function for GC01M052352 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M052352 Gene

Localization for GC01M052352 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M052352 Gene

Pathways & Interactions for GC01M052352 Gene

PathCards logo

SuperPathways for GC01M052352 Gene

No Data Available

Interacting Proteins for GC01M052352 Gene

Gene Ontology (GO) - Biological Process for GC01M052352 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M052352 Gene

Drugs & Compounds for GC01M052352 Gene

No Compound Related Data Available

Transcripts for GC01M052352 Gene

fRNAdb Secondary structures for GC01M052352 Gene

  • FR389218

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M052352 Gene

No ASD Table

Relevant External Links for GC01M052352 Gene

GeneLoc Exon Structure for
GC01M052352

No data available for mRNA/cDNA for GC01M052352 Gene

Expression for GC01M052352 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M052352 Gene

Orthologs for GC01M052352 Gene

No data available for Orthologs and Evolution for GC01M052352 Gene

Paralogs for GC01M052352 Gene

No data available for Paralogs for GC01M052352 Gene

Variants for GC01M052352 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M052352 Gene

Disorders for GC01M052352 Gene

No disorders were found for GC01M052352 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M052352 Gene

Publications for GC01M052352 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

No data available for External Links for GC01M052352 Gene

Products for GC01M052352 Gene

Sources for GC01M052352 Gene

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