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Aliases for GC01M048001 Gene

Subcategory (RNA class) for GC01M048001 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01M048001 Gene

No Aliases found

ORGUL Members for GC01M048001 Gene

No data available for External Ids for GC01M048001 Gene

Summaries for GC01M048001 Gene

GeneCards Summary for GC01M048001 Gene

GC01M048001 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01M048001 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M048001 Gene

Genomics for GC01M048001 Gene

GeneHancer (GH) Regulatory Elements for GC01M048001 Gene

Promoters and enhancers for GC01M048001 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J048003 Enhancer 1 Ensembl ENCODE 0.7 -3.4 -3377 4.2 SP1 ZNF121 BACH1 MAFK SP7 ZBTB8A ZNF512 NFE2L2 ZSCAN4 ZEB2 TRABD2B ENSG00000225028 SLC5A9 LINC01389 GC01M048001 LINC02794
GH01J048017 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 -14.5 -14497 7.6 ZNF680 PKNOX1 CEBPB JUN RCOR1 JUND GABPA EP300 NR2C2 FOSL1 LINC02794 SLC5A9 GC01M048001
GH01J048024 Enhancer 0.8 Ensembl ENCODE 0.3 -23.8 -23771 2.7 ZKSCAN8 ZNF239 CEBPB JUN EZH2 JUND OSR2 EP300 FOSL1 ZNF18 SLC5A9 LINC02794 GC01M048001
GH01J048038 Enhancer 0.5 Ensembl 0.3 -37.4 -37397 2.6 ZIC2 ZNF189 ZFHX2 GLIS1 ZNF398 KLF1 EGR2 FOXD2-AS1 SLC5A9 LINC02794 GC01M048001
GH01J048035 Enhancer 0.5 Ensembl 0.3 -33.7 -33697 0.4 ZIC2 ZFHX2 GLIS1 EGR2 LINC02794 GC01M048001
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M048001 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M048001 Gene

Genomic Locations for GC01M048001 Gene
chr1:48,001,530-48,002,304
(GRCh38/hg38)
Size:
775 bases
Orientation:
Minus strand

Genomic View for GC01M048001 Gene

Genes around GC01M048001 on UCSC Golden Path with GeneCards custom track

GC01M048001 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M048001 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M048001 Gene

Proteins for GC01M048001 Gene

Post-translational modifications for GC01M048001 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M048001 Gene

Domains & Families for GC01M048001 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M048001 Gene

Function for GC01M048001 Gene

Phenotypes From GWAS Catalog for GC01M048001 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M048001 Gene

Localization for GC01M048001 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M048001 Gene

Pathways & Interactions for GC01M048001 Gene

PathCards logo

SuperPathways for GC01M048001 Gene

No Data Available

Interacting Proteins for GC01M048001 Gene

Gene Ontology (GO) - Biological Process for GC01M048001 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M048001 Gene

Drugs & Compounds for GC01M048001 Gene

No Compound Related Data Available

Transcripts for GC01M048001 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M048001 Gene

No ASD Table

Relevant External Links for GC01M048001 Gene

GeneLoc Exon Structure for
GC01M048001

No data available for mRNA/cDNA for GC01M048001 Gene

Expression for GC01M048001 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M048001 Gene

Orthologs for GC01M048001 Gene

No data available for Orthologs and Evolution for GC01M048001 Gene

Paralogs for GC01M048001 Gene

No data available for Paralogs for GC01M048001 Gene

Variants for GC01M048001 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M048001 Gene

Disorders for GC01M048001 Gene

No disorders were found for GC01M048001 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M048001 Gene

Publications for GC01M048001 Gene

No publications were found for GC01M048001 Gene.

No data available for External Links for GC01M048001 Gene

Products for GC01M048001 Gene

Sources for GC01M048001 Gene

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