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Aliases for GC01M046749 Gene

Subcategory (RNA class) for GC01M046749 Gene

lncRNA

Quality Score for this RNA gene is

11

Aliases for GC01M046749 Gene

No Aliases found

No data available for External Ids for GC01M046749 Gene

Summaries for GC01M046749 Gene

GeneCards Summary for GC01M046749 Gene

GC01M046749 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC01M046749 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

Additional gene information for GC01M046749 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M046749 Gene

Genomics for GC01M046749 Gene

GeneHancer (GH) Regulatory Elements for GC01M046749 Gene

Promoters and enhancers for GC01M046749 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I046757 Enhancer 0.9 ENCODE dbSUPER 0.4 +19.9 19887 2.6 SIX4 PKNOX1 ESRRA NFIB NEUROD1 CTBP1 GATA3 POLR2A RFX1 HLF CYP4B1 EFCAB14 LOC105378699 GC01P046743 GC01M046749
GH01I046754 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +22.8 22795 2.7 RFX1 NEUROD1 MAFG ZNF217 ZNF316 GATA3 CREB1 CUX1 EMSY MAFK CYP4B1 GC01P046743 GC01M046749
GH01I046804 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 -27.9 -27890 4.2 PKNOX1 CLOCK HLF MAX CEBPB REST NR2F2 GATA3 CREB1 PRDM10 CYP4B1 CYP4A11 CYP4X1 GC01M046749 LOC100533627
GH01I046769 Enhancer 0.7 ENCODE dbSUPER 0.4 +9.0 9014 0.2 SMARCE1 DPF2 FOS ZNF592 LOC105378699 GC01M046749 CYP4B1
GH01I046767 Enhancer 0.6 dbSUPER 0.4 +10.3 10296 1.3 BACH1 MAFG ZNF316 MAFF NFE2 EMSY MAFK NFE2L2 LOC105378699 CYP4B1 GC01M046749
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC01M046749 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M046749 Gene

Genomic Locations for GC01M046749 Gene
chr1:46,749,930-46,778,258
(GRCh38/hg38)
Size:
28,329 bases
Orientation:
Minus strand

Genomic View for GC01M046749 Gene

Genes around GC01M046749 on UCSC Golden Path with GeneCards custom track

GC01M046749 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M046749 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01M046749 Gene

ORGUL Member Location for GC01M046749 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M046749 Gene

Proteins for GC01M046749 Gene

Post-translational modifications for GC01M046749 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M046749 Gene

Domains & Families for GC01M046749 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M046749 Gene

Function for GC01M046749 Gene

Animal Model Products

miRNA for GC01M046749 Gene

miRTarBase miRNAs that target GC01M046749

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC01M046749 Gene

Localization for GC01M046749 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M046749 Gene

Pathways & Interactions for GC01M046749 Gene

SuperPathways for GC01M046749 Gene

No Data Available

Interacting Proteins for GC01M046749 Gene

Gene Ontology (GO) - Biological Process for GC01M046749 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M046749 Gene

Drugs & Compounds for GC01M046749 Gene

No Compound Related Data Available

Transcripts for GC01M046749 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M046749 Gene

No ASD Table

Relevant External Links for GC01M046749 Gene

GeneLoc Exon Structure for
GC01M046749

No data available for mRNA/cDNA for GC01M046749 Gene

Expression for GC01M046749 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M046749 Gene

Orthologs for GC01M046749 Gene

No data available for Orthologs and Evolution for GC01M046749 Gene

Paralogs for GC01M046749 Gene

No data available for Paralogs for GC01M046749 Gene

Variants for GC01M046749 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M046749 Gene

Disorders for GC01M046749 Gene

No disorders were found for GC01M046749 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M046749 Gene

Publications for GC01M046749 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Identification and characterization of human non-coding RNAs with tissue-specific expression. (PMID: 17451645) Sasaki YT … Hirose T (Biochemical and biophysical research communications 2007) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC01M046749 Gene

Sources for GC01M046749 Gene

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