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Aliases for GC01M046344 Gene

Subcategory (RNA class) for GC01M046344 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for GC01M046344 Gene

No Aliases found

ORGUL Members for GC01M046344 Gene

No data available for External Ids for GC01M046344 Gene

Summaries for GC01M046344 Gene

GeneCards Summary for GC01M046344 Gene

GC01M046344 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC01M046344 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

Additional gene information for GC01M046344 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M046344 Gene

Genomics for GC01M046344 Gene

GeneHancer (GH) Regulatory Elements for GC01M046344 Gene

Promoters and enhancers for GC01M046344 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J046338 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 0.7 +4.1 4146 5.5 MTA3 SP1 ELF3 ZFX CTCF MNT SIX5 NKRF POLR2A MLLT1 NSUN4 LRRC41 GPBP1L1 ENSG00000234329 EFCAB14-AS1 LURAP1 UQCRH RPS15AP10 MOB3C PIK3R3
GH01J046347 Enhancer 1.2 Ensembl ENCODE 0.7 -3.5 -3461 2.9 ELF3 CC2D1A CTCF MLLT1 ZSCAN21 CDC5L BACH1 MAFK SP7 PRDM1 NSUN4 LRRC41 EFCAB14-AS1 GPBP1L1 UQCRH ENSG00000234329 CYP4B1 LURAP1 FAAH FAAHP1
GH01J046369 Enhancer 0.8 ENCODE 0.3 -24.4 -24371 1 CBFA2T2 ZNF687 SMARCA4 MTA1 IKZF1 DPF2 ATF1 REST PKNOX1 HDAC1 ENSG00000225779 NSUN4 GC01M046344
GH01J046352 Promoter 0.5 EPDnew 0.4 -7.3 -7301 0.1 FAAH LRRC41 UQCRH GC01M046344 NSUN4 ENSG00000225779
GH01J046356 Enhancer 0.3 Ensembl 0.4 -11.5 -11507 1.6 ZNF316 NSUN4 CCDC163 GC01M046344 ENSG00000225779
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M046344 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M046344 Gene

Genomic Locations for GC01M046344 Gene
chr1:46,343,996-46,345,694
(GRCh38/hg38)
Size:
1,699 bases
Orientation:
Minus strand

Genomic View for GC01M046344 Gene

Genes around GC01M046344 on UCSC Golden Path with GeneCards custom track

GC01M046344 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M046344 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M046344 Gene

Proteins for GC01M046344 Gene

Post-translational modifications for GC01M046344 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M046344 Gene

Domains & Families for GC01M046344 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M046344 Gene

Function for GC01M046344 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M046344 Gene

Localization for GC01M046344 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M046344 Gene

Pathways & Interactions for GC01M046344 Gene

PathCards logo

SuperPathways for GC01M046344 Gene

No Data Available

Interacting Proteins for GC01M046344 Gene

Gene Ontology (GO) - Biological Process for GC01M046344 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M046344 Gene

Drugs & Compounds for GC01M046344 Gene

No Compound Related Data Available

Transcripts for GC01M046344 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M046344 Gene

No ASD Table

Relevant External Links for GC01M046344 Gene

GeneLoc Exon Structure for
GC01M046344

No data available for mRNA/cDNA for GC01M046344 Gene

Expression for GC01M046344 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M046344 Gene

Orthologs for GC01M046344 Gene

No data available for Orthologs and Evolution for GC01M046344 Gene

Paralogs for GC01M046344 Gene

No data available for Paralogs for GC01M046344 Gene

Variants for GC01M046344 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M046344 Gene

Disorders for GC01M046344 Gene

No disorders were found for GC01M046344 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M046344 Gene

Publications for GC01M046344 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC01M046344 Gene

Products for GC01M046344 Gene

Sources for GC01M046344 Gene

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