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Aliases for GC01M027883 Gene

Subcategory (RNA class) for GC01M027883 Gene

antisense

Quality Score for this RNA gene is

13

Aliases for GC01M027883 Gene

No Aliases found

ORGUL Members for GC01M027883 Gene

No data available for External Ids for GC01M027883 Gene

Summaries for GC01M027883 Gene

GeneCards Summary for GC01M027883 Gene

GC01M027883 is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for GC01M027883 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M027883 Gene

Genomics for GC01M027883 Gene

GeneHancer (GH) Regulatory Elements for GC01M027883 Gene

Promoters and enhancers for GC01M027883 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J027881 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.9 -3937 11.7 CEBPG ZNF687 RELA SP1 CREM MLLT1 ZBED1 IKZF1 ZBTB33 PKNOX1 RPA2 XKR8 THEMIS2 SMPDL3B ENSG00000227050 EYA3 SCARNA1 PPP1R8 RNU6-1245P FGR
GH01J027871 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.3 9250 5.3 ZNF652 SP1 NKRF ZNF687 NFIB MAFK SP7 RELA CREM MLLT1 THEMIS2 FGR YTHDF2 EYA3 GMEB1 RPA2 PHACTR4 TRNAU1AP XKR8 SNHG12
GH01J027913 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.3 -30.6 -30626 2.2 SP1 CC2D1A ELF3 SIX5 NKRF MLLT1 ZNF121 POLR2A GTF2F1 CSDE1 RPA2 GMEB1 ACTG1P20 FAM76A PPP1R8 SNHG12 TRNAU1AP PTAFR WASF2 YTHDF2
GH01J027879 Enhancer 0.8 ENCODE dbSUPER 0.7 +4.4 4369 0.2 CBFA2T2 IKZF1 ZNF600 SMAD5 DPF2 NR2F1 RCOR1 EBF1 TCF12 TAL1 GC01M027883 THEMIS2
GH01J027877 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +5.5 5456 1.6 ZNF687 MLLT1 ZNF600 IKZF2 SMAD5 NR2F1 RPA2 SCARNA1 PPP1R8 RNU6-1245P ENSG00000270605 MAP3K6 GC01M027883 THEMIS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M027883 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M027883 Gene

Genomic Locations for GC01M027883 Gene
chr1:27,883,009-27,883,874
(GRCh38/hg38)
Size:
866 bases
Orientation:
Minus strand

Genomic View for GC01M027883 Gene

Genes around GC01M027883 on UCSC Golden Path with GeneCards custom track

GC01M027883 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M027883 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M027883 Gene

Proteins for GC01M027883 Gene

Post-translational modifications for GC01M027883 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M027883 Gene

Domains & Families for GC01M027883 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M027883 Gene

Function for GC01M027883 Gene

Phenotypes From GWAS Catalog for GC01M027883 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M027883 Gene

Localization for GC01M027883 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M027883 Gene

Pathways & Interactions for GC01M027883 Gene

PathCards logo

SuperPathways for GC01M027883 Gene

No Data Available

Interacting Proteins for GC01M027883 Gene

Gene Ontology (GO) - Biological Process for GC01M027883 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M027883 Gene

Drugs & Compounds for GC01M027883 Gene

No Compound Related Data Available

Transcripts for GC01M027883 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M027883 Gene

No ASD Table

Relevant External Links for GC01M027883 Gene

GeneLoc Exon Structure for
GC01M027883

No data available for mRNA/cDNA for GC01M027883 Gene

Expression for GC01M027883 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M027883 Gene

Orthologs for GC01M027883 Gene

No data available for Orthologs and Evolution for GC01M027883 Gene

Paralogs for GC01M027883 Gene

No data available for Paralogs for GC01M027883 Gene

Variants for GC01M027883 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M027883 Gene

Disorders for GC01M027883 Gene

No disorders were found for GC01M027883 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M027883 Gene

Publications for GC01M027883 Gene

No publications were found for GC01M027883 Gene.

No data available for External Links for GC01M027883 Gene

Products for GC01M027883 Gene

Sources for GC01M027883 Gene

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