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Aliases for GC01M016499 Gene

Subcategory (RNA class) for GC01M016499 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01M016499 Gene

No Aliases found

ORGUL Members for GC01M016499 Gene

No data available for External Ids for GC01M016499 Gene

Summaries for GC01M016499 Gene

GeneCards Summary for GC01M016499 Gene

GC01M016499 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01M016499 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M016499 Gene

Genomics for GC01M016499 Gene

GeneHancer (GH) Regulatory Elements for GC01M016499 Gene

Promoters and enhancers for GC01M016499 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J016498 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.6 2615 2.8 ZNF652 ZFX ELF3 MNT ZNF148 NKRF MLLT1 ZNF121 ZNF384 ZNF687 CROCCP3 ENSG00000237938 NECAP2 ARHGEF19 SPATA21 SPEN ENSG00000178715 ENSG00000224621 DDI2 RCC2
GH01J016513 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.4 -12.4 -12439 2.3 CC2D1A MLLT1 ZNF121 NFIB ZSCAN21 CDC5L YY1 SP7 KLF14 PRDM1 ENSG00000285853 RNU1-1 ENSG00000261135 CROCC SPEN ENSG00000237938 CROCCP3 ZBTB17 RPL22P3 ARHGEF19
GH01J016506 Enhancer 1.1 Ensembl ENCODE 0.4 -5.2 -5173 1.2 SP7 TRIM24 KLF14 PRDM1 MZF1 ZNF560 SMARCA4 CAVIN1 DPF2 ZNF544 CROCCP3 LINC01772 CROCC SPEN ENSG00000237301 ENSG00000235241 ENSG00000272426 RNU1-1 GC01M016499
GH01J016512 Enhancer 0.9 ENCODE 0.4 -11.2 -11205 0.2 CC2D1A MLLT1 ZNF121 YY1 KLF14 MZF1 SMARCA4 MTA1 GMEB1 DPF2 ENSG00000261135 RNU1-1 CROCC CROCCP3 SPEN ENSG00000235241 GC01M016499
GH01J016507 Enhancer 0.5 ENCODE 0.7 -4.5 -4538 0 CEBPA RXRB GLIS1 RARA GC01M016499 RNU1-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M016499 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M016499 Gene

Genomic Locations for GC01M016499 Gene
chr1:16,499,443-16,501,616
(GRCh38/hg38)
Size:
2,174 bases
Orientation:
Minus strand

Genomic View for GC01M016499 Gene

Genes around GC01M016499 on UCSC Golden Path with GeneCards custom track

GC01M016499 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M016499 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M016499 Gene

Proteins for GC01M016499 Gene

Post-translational modifications for GC01M016499 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M016499 Gene

Domains & Families for GC01M016499 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M016499 Gene

Function for GC01M016499 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M016499 Gene

Localization for GC01M016499 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M016499 Gene

Pathways & Interactions for GC01M016499 Gene

PathCards logo

SuperPathways for GC01M016499 Gene

No Data Available

Interacting Proteins for GC01M016499 Gene

Gene Ontology (GO) - Biological Process for GC01M016499 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M016499 Gene

Drugs & Compounds for GC01M016499 Gene

No Compound Related Data Available

Transcripts for GC01M016499 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M016499 Gene

No ASD Table

Relevant External Links for GC01M016499 Gene

GeneLoc Exon Structure for
GC01M016499

No data available for mRNA/cDNA for GC01M016499 Gene

Expression for GC01M016499 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M016499 Gene

Orthologs for GC01M016499 Gene

No data available for Orthologs and Evolution for GC01M016499 Gene

Paralogs for GC01M016499 Gene

No data available for Paralogs for GC01M016499 Gene

Variants for GC01M016499 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M016499 Gene

Disorders for GC01M016499 Gene

No disorders were found for GC01M016499 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M016499 Gene

Publications for GC01M016499 Gene

No publications were found for GC01M016499 Gene.

No data available for External Links for GC01M016499 Gene

Products for GC01M016499 Gene

Sources for GC01M016499 Gene

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