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Aliases for GC01M009152 Gene

Subcategory (RNA class) for GC01M009152 Gene


Quality Score for this RNA gene is


Aliases for GC01M009152 Gene

No Aliases found

No data available for External Ids for GC01M009152 Gene

Summaries for GC01M009152 Gene

GeneCards Summary for GC01M009152 Gene

GC01M009152 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC01M009152 Gene - the ORGUL cluster for this gene includes several descriptions:

  • miRNA: Small, ~22-nt, RNA molecule that is the endogenous transcript of a miRNA gene. Micro RNAs are produced from precursor molecules (SO:0000647) that can form local hairpin structures, which ordinarily are processed (via the Dicer pathway) such that a single miRNA molecule accumulates from one arm of a hairpin precursor molecule. Micro RNAs may trigger the cleavage of their target molecules or act as translational repressors.

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC01M009152

Additional gene information for GC01M009152 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC01M009152 Gene

Genomics for GC01M009152 Gene

GeneHancer (GH) Regulatory Elements for GC01M009152 Gene

Promoters and enhancers for GC01M009152 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J009149 Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 +1.0 1031 3.1 BACH1 TRIM24 RFX1 ATF1 ZNF341 SCRT2 CTBP1 GABPA NR2C2 ZFHX2 GC01M009152 MIR34A SLC2A5 GPR157 MIR34AHG
GH01J009145 Enhancer 1 ENCODE dbSUPER 0.4 +6.3 6319 0.8 ZNF121 CEBPG KAT8 CREB1 GLIS2 PRDM10 CEBPA GATAD2A ATF1 ATF7 SLC2A5 GPR157 GC01M009152
GH01J009143 Enhancer 0.8 ENCODE dbSUPER 0.4 +8.2 8173 0.9 ZEB2 MTA2 ZBTB5 ZNF366 ZSCAN16 HLTF POLR2A MYC MAX GC01M009152 GPR157
GH01J009142 Enhancer 0.7 ENCODE 0.4 +9.3 9344 0.2 CTCF SP7 CREM RAD21 ZNF600 ZNF143 REST ZEB2 TRIM22 ZBTB48 GC01M009152 GPR157
GH01J009135 Enhancer 0.9 FANTOM5 Ensembl 0.4 +16.4 16361 1.2 IKZF1 IKZF2 PKNOX1 CBFB EED RUNX3 ELF1 NR2F1 NBN EBF1 SLC2A5 GPR157 SLC25A33 GC01M009152
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M009152 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M009152 Gene

Genomic Locations for GC01M009152 Gene
74 bases
Minus strand

Genomic View for GC01M009152 Gene

Genes around GC01M009152 on UCSC Golden Path with GeneCards custom track

GC01M009152 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M009152 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC01M009152 Gene

ORGUL Member Location for GC01M009152 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M009152 Gene

Proteins for GC01M009152 Gene

Post-translational modifications for GC01M009152 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M009152 Gene

Domains & Families for GC01M009152 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M009152 Gene

Function for GC01M009152 Gene

Phenotypes From GWAS Catalog for GC01M009152 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M009152 Gene

Localization for GC01M009152 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M009152 Gene

Pathways & Interactions for GC01M009152 Gene

PathCards logo

SuperPathways for GC01M009152 Gene

No Data Available

Interacting Proteins for GC01M009152 Gene

Gene Ontology (GO) - Biological Process for GC01M009152 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC01M009152 Gene

Drugs & Compounds for GC01M009152 Gene

No Compound Related Data Available

Transcripts for GC01M009152 Gene

fRNAdb Secondary structures for GC01M009152 Gene

  • FR109864
  • FR136403

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M009152 Gene

No ASD Table

Relevant External Links for GC01M009152 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC01M009152 Gene

Expression for GC01M009152 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M009152 Gene

Orthologs for GC01M009152 Gene

No data available for Orthologs and Evolution for GC01M009152 Gene

Paralogs for GC01M009152 Gene

No data available for Paralogs for GC01M009152 Gene

Variants for GC01M009152 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M009152 Gene

Disorders for GC01M009152 Gene

No disorders were found for GC01M009152 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M009152 Gene

Publications for GC01M009152 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. NONCODE: an integrated knowledge database of non-coding RNAs. (PMID: 15608158) Liu C … Chen R (Nucleic acids research 2005) 1
  3. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  4. Vertebrate microRNA genes. (PMID: 12624257) Lim LP … Bartel DP (Science (New York, N.Y.) 2003) 1
  5. Evolutionary biology. Small but mighty timekeepers. (PMID: 11081491) Adoutte A (Nature 2000) 1

No data available for External Links for GC01M009152 Gene

Products for GC01M009152 Gene

Sources for GC01M009152 Gene

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