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Aliases for GC01M001678 Gene

Subcategory (RNA class) for GC01M001678 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC01M001678 Gene

No Aliases found

ORGUL Members for GC01M001678 Gene

No data available for External Ids for GC01M001678 Gene

Summaries for GC01M001678 Gene

GeneCards Summary for GC01M001678 Gene

GC01M001678 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC01M001678 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC01M001678 Gene

Genomics for GC01M001678 Gene

GeneHancer (GH) Regulatory Elements for GC01M001678 Gene

Promoters and enhancers for GC01M001678 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J001683 Enhancer 0.6 ENCODE dbSUPER 600.7 +0.4 432 1.1 ZFHX2 EGR2 GC01M001678 CDK11B SLC35E2B PIR58823
GH01J001685 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -2.7 -2706 4 ZNF384 NCOA3 BACH1 MAFK TRIM24 SMARCA4 FOSL2 DPF2 IKZF1 ZNF600 CDK11B CDK11A SLC35E2B HES5 ANKRD65 GC01M001678
GH01J001677 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.4 +5.8 5812 2.4 SP1 CTCF RERE ZNF687 PPARG SP5 CREM MLLT1 RAD21 ZBED1 SLC35E2A ENSG00000227775 ENSG00000272106 PIR58823 GC01M001678 SLC35E2B
GH01J001680 Enhancer 0.9 ENCODE dbSUPER 0.7 +3.2 3248 0.2 KAT8 ZIC2 GATAD2A FOXA2 SAP130 ZNF792 ZNF614 ZNF18 ZGPAT BCL6 CDK11B GC01M001678 PIR58823 SLC35E2B
GH01J001682 Enhancer 0.6 dbSUPER 0.7 +3.7 3735 0.5 GATAD2A ZNF792 ZGPAT TCF12 TAL1 ZNF48 RBPJ CBFA2T3 SLC35E2B GC01M001678 PIR58823
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC01M001678 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC01M001678 Gene

Genomic Locations for GC01M001678 Gene
chr1:1,675,463-1,684,295
(GRCh38/hg38)
Size:
8,833 bases
Orientation:
Minus strand

Genomic View for GC01M001678 Gene

Genes around GC01M001678 on UCSC Golden Path with GeneCards custom track

GC01M001678 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC01M001678 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC01M001678 Gene

Proteins for GC01M001678 Gene

Post-translational modifications for GC01M001678 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC01M001678 Gene

Domains & Families for GC01M001678 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC01M001678 Gene

Function for GC01M001678 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC01M001678 Gene

Localization for GC01M001678 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC01M001678 Gene

Pathways & Interactions for GC01M001678 Gene

PathCards logo

SuperPathways for GC01M001678 Gene

No Data Available

Interacting Proteins for GC01M001678 Gene

Gene Ontology (GO) - Biological Process for GC01M001678 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC01M001678 Gene

Drugs & Compounds for GC01M001678 Gene

No Compound Related Data Available

Transcripts for GC01M001678 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC01M001678 Gene

No ASD Table

Relevant External Links for GC01M001678 Gene

GeneLoc Exon Structure for
GC01M001678

No data available for mRNA/cDNA for GC01M001678 Gene

Expression for GC01M001678 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC01M001678 Gene

Orthologs for GC01M001678 Gene

No data available for Orthologs and Evolution for GC01M001678 Gene

Paralogs for GC01M001678 Gene

No data available for Paralogs for GC01M001678 Gene

Variants for GC01M001678 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC01M001678 Gene

Disorders for GC01M001678 Gene

No disorders were found for GC01M001678 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC01M001678 Gene

Publications for GC01M001678 Gene

No publications were found for GC01M001678 Gene.

No data available for External Links for GC01M001678 Gene

Products for GC01M001678 Gene

Sources for GC01M001678 Gene

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