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This gene belongs to the guanine-binding protein (GBP) family, which includes interferon-induced proteins that can bind to guanine nucleotides (GMP, GDP and GTP). The encoded protein is a GTPase which hydrolyzes GTP, predominantly to GDP. The protein may play a role as a marker of squamous cell carcinomas. [provided by RefSeq, Jul 2013]
GBP2 (Guanylate Binding Protein 2) is a Protein Coding gene. Among its related pathways are Innate Immune System and Interferon gamma signaling. Gene Ontology (GO) annotations related to this gene include GTP binding and GTPase activity. An important paralog of this gene is GBP3.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000166 | nucleotide binding | IEA | -- |
GO:0003924 | GTPase activity | IBA | 21873635 |
GO:0005515 | protein binding | IPI | 18985028 |
GO:0005525 | GTP binding | TAS,IBA | 21873635 |
GO:0016787 | hydrolase activity | IEA | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000139 | Golgi membrane | IEA | -- |
GO:0005634 | nucleus | IDA | 17266443 |
GO:0005654 | nucleoplasm | IDA | -- |
GO:0005737 | cytoplasm | IEA,IDA | 21151871 |
GO:0005794 | Golgi apparatus | IEA,IDA | 17266443 |
SuperPathway | Contained pathways | ||
---|---|---|---|
1 | Interferon gamma signaling | ||
2 | NOD-like receptor signaling pathway | ||
3 | Cytokine Signaling in Immune system | ||
4 | Innate Immune System |
.61
|
|
5 | Immune response IFN alpha/beta signaling pathway |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0006955 | immune response | TAS | 1715024 |
GO:0034504 | protein localization to nucleus | IDA | 21151871 |
GO:0042832 | defense response to protozoan | IBA | 21873635 |
GO:0050830 | defense response to Gram-positive bacterium | IBA | 21873635 |
GO:0060333 | interferon-gamma-mediated signaling pathway | TAS | -- |
Name | Status | Disease Links | Group | Role | Mechanism of Action | Clinical Trials |
---|---|---|---|---|---|---|
Guanosine triphosphate | Experimental | Pharma | 0 |
This gene was present in the common ancestor of chordates.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | GBP2 30 31 |
|
OneToOne | |
Cow (Bos Taurus) |
Mammalia | GBP2 30 |
|
||
-- 31 |
|
OneToMany | |||
-- 31 |
|
OneToMany | |||
Rat (Rattus norvegicus) |
Mammalia | Gbp2 30 |
|
||
Mouse (Mus musculus) |
Mammalia | Gbp2 30 17 31 |
|
OneToMany | |
Gbp2b 31 |
|
OneToMany | |||
Oppossum (Monodelphis domestica) |
Mammalia | -- 31 |
|
ManyToMany | |
Platypus (Ornithorhynchus anatinus) |
Mammalia | -- 31 |
|
ManyToMany | |
Chicken (Gallus gallus) |
Aves | GBP 30 |
|
||
-- 31 |
|
ManyToMany | |||
African clawed frog (Xenopus laevis) |
Amphibia | LOC398692 30 |
|
||
Zebrafish (Danio rerio) |
Actinopterygii | si:ch211-209n20.1 31 |
|
ManyToMany |
SNP ID | Clinical significance and condition | Chr 01 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
rs386352304 | Uncertain Significance: not provided | 89,120,286(-) |
A/C NM_004120.5(GBP2):c.321T>G (p.Gly107=) |
SYNONYMOUS | |
rs1803632 | - |
p.Pro285Ala |
|||
rs2230336 | - |
p.Ser281Pro |
|||
rs2230338 | - |
p.Ser303Gly |
No disorders were found for GBP2 Gene.